Nicotiana tabacum (common tobacco): 107822500
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Entry
107822500 CDS
T04643
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03410
Base excision repair
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107822500
03410 Base excision repair
107822500
03420 Nucleotide excision repair
107822500
03430 Mismatch repair
107822500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nta03032
]
107822500
03036 Chromosome and associated proteins [BR:
nta03036
]
107822500
03400 DNA repair and recombination proteins [BR:
nta03400
]
107822500
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107822500
DNA Replication Termination Factors
ELG1-RFC complex
107822500
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107822500
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107822500
Check point factors
HRAD17(Rad24)-RFC complex
107822500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
RCF1-5-like_lid
AAA_16
AAA_22
DUF815
AAA_assoc_2
AAA_11
AAA_5
AAA_14
ATPase_2
RuvB_N
AAA_24
DNAX_ATPase_lid
AAA_30
AAA_7
nSTAND_NTPase5
ResIII
AAA_3
AAA_19
nSTAND3
bpMoxR
AAA_28
SLFN-g3_helicase
AAA_2
Mg_chelatase
AAA_18
RNA_helicase
DO-GTPase1
AAA_25
ABC_tran
nSTAND6
Motif
Other DBs
NCBI-GeneID:
107822500
NCBI-ProteinID:
XP_016504541
UniProt:
A0A1S4CTV0
LinkDB
All DBs
Position
8:complement(59862123..59866386)
Genome browser
AA seq
360 aa
AA seq
DB search
MAEPISLMDIDDDKIDTKPNKGKNIIFSSSTADPKAVPWVEKFRPQSLSDVAAHRDIVET
IDRLASGNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQ
IQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALICNNVNKV
IPALQSRCTRFRFAPLDAVHVSERLKHVIEAERLDVPEGGLKALVRLCNGDMRKALNILQ
STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEPFALSCKRISEIKTRKGLALVDIV
REVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGCNDKLQLGSLIAAFTRARSALVAAAK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccaatctcgttaatggatatcgacgatgacaaaatcgacacgaaaccaaac
aagggtaaaaacataatcttttcaagctccacagctgaccccaaagcagttccttgggtc
gaaaagtttcgtcctcagtccctctctgacgtcgctgctcatcgcgatatagttgaaacc
attgataggctagcgagtggtaataggttgccgcatttgctgctatatggacctcctgga
actggaaaaacatctacaattctcgcgcttgcacggaagctatatgggtctcagatgcac
aatatggttttggagctgaatgcatctgatgatcgtgggattgacgtggtgcgccagcag
attcaggattttgctagtactcagagcatctcctttggtgctaagtcagcagtgaagcta
gtactattggatgaagcagatgcaatgacaaaggatgcacagtttgccctgcgtcgagtt
attgagaaatatacaagaaacactaggtttgcactgatatgcaacaatgtcaataaggtt
attcctgccctacaatcacgatgtacacggtttaggtttgctccacttgatgcagttcat
gtatctgagcggctgaaacatgttattgaggctgaaaggcttgatgtccctgagggtggt
ttaaaggcacttgtacgactgtgcaatggtgatatgcgaaaagctttaaacattctgcag
tcaacgcacatggcttctcagcagattacagaagaagctgtgtatctgtgcactggaaac
ccattgcccaaggacattgagcagatctcttactggcttctgaatgaaccctttgctctc
agttgcaaacgaatatcagaaatcaagacaagaaaaggattggctctggtggatatcgtg
agagaagtaaccatgtttgtcttcaaaattaaaatgccgccaaatgttcgggttcagctg
atcaatgagatggctaatattgagtataggttgacttttggttgcaatgataagttgcag
cttggatcactgattgctgcttttacacgagcaagatctgcacttgttgcagctgcgaag
taa
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