Nicotiana tabacum (common tobacco): 107822563
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Entry
107822563 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107822563
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107822563
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
Helicases
107822563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
ResIII
ParD_antitoxin
P-loop_SecA
SLAM
Motif
Other DBs
NCBI-GeneID:
107822563
NCBI-ProteinID:
XP_016504604
UniProt:
A0A1S4CUD5
LinkDB
All DBs
Position
Un
AA seq
517 aa
AA seq
DB search
MEKDASFLFGGITFNRKKFATDFDRFKEHKTRDNSLEKLEFVENEKSEMEDETNTRVGKK
RKRKEKGVVPDSVDGFSVFKNSKLQKESASEENDQSANELLEGKKEYYRQLERDAIFRKL
HGIHASGSNVPSPLHSFAELRSRYKCRLYLLRNLAELGFKEPTPIQRQAIPVLLSVVGHL
TAIFLDQDTSNDGVRAVILSPTKELAAQTTRECRKLAKGKKFYIRLMTKKLAKSGDFSKL
RCDILISTPLRLQFAIRKGKLDLSRVEFLVLDESDKLFEPGLLEQVDFVVNACTNPSILR
SLFSATLPDIVEDRARTIMHDAVRVIIGRKNSASETIKQKLVFVGSEEGKLLALRQSFAE
RLSPPVLVFVQNKERAKELYDELKLEDFRADVIHSDLSQTQRENAVDNFRAGKTWVLIAT
DVVSRGMDFKGVNCVINYDFPDAAAAYIHRIGRTGRAGRRGEAITFYTEADIPFLRNIAN
VITSSGGEVPEWIMSMTKKQWKKHRPQRETISTQPDI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatgcatcttttttgtttggcggcatcactttcaatcgtaaaaagtttgcc
accgattttgacaggtttaaggagcataaaacaagggacaattcattagagaagctggag
ttcgttgaaaatgaaaaatctgaaatggaagatgagacaaatacccgtgtgggtaagaag
aggaagagaaaggagaaaggagtagttcctgactcggtggacggattttccgtcttcaag
aattcgaaattgcaaaaggaatctgccagtgaagagaatgatcaatctgcaaatgaattg
cttgagggaaaaaaagaatattatcggcaattggagagggatgcaattttccggaagtta
catggcattcatgcttctggaagtaatgtcccttcgccattgcacagttttgcagaatta
agatcaagatataaatgtcgattatatctattacgcaacctggcagaactgggatttaaa
gaaccaacaccaatccaaagacaggctattccagtcctcttatctgttgttggacatctg
acagccatctttcttgatcaggatacttcaaatgatggtgtccgagctgtaattctttcc
cctacaaaagagttagctgctcagactacaagagaatgccgaaagttggctaaagggaag
aagttctacatcaggttgatgactaaaaagctcgctaaaagtggagacttttctaaactg
cgatgtgatatactcatctcgacaccattgcgcttacagtttgctatccgcaaaggaaag
cttgatttaagtagggttgaatttcttgtcttagatgaatctgataagctttttgagcct
ggcttgctagagcaggttgattttgtggtgaacgcgtgcacaaatccttcaattcttcgg
tcgttgttcagtgctactttacctgatatagttgaagacagagcacgtacaataatgcat
gatgctgttcgagtcattattggtaggaaaaattctgcttccgaaacaataaagcaaaag
ttggtattcgtagggagtgaagaaggaaaacttctagctcttcgtcaaagctttgcagag
agattgagtccaccggtgctagtattcgttcaaaacaaggagcgtgcaaaggagctatat
gacgaactaaaattggaagattttcgagctgatgttatccattcagatctttctcagaca
cagagagaaaatgctgttgataactttagagctggaaaaacatgggttctaattgccacg
gatgttgtgtcccggggaatggatttcaaaggggtcaattgcgtaataaattatgatttt
ccagacgctgctgcagcatacattcacagaattggacgtaccggaagagcaggaagaaga
ggagaggcgattacattttatactgaagcagatattccttttttgaggaacatagcaaat
gttattacttcttctggtggtgaggttcccgagtggattatgtcaatgaccaagaaacag
tggaagaaacacaggccacaaagagaaaccatttcaactcagccagacatatga
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