Nicotiana tabacum (common tobacco): 107823071
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Entry
107823071 CDS
T04643
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107823071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107823071
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
SR proteins
107823071
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
107823071
NCBI-ProteinID:
XP_016505151
UniProt:
A0A1S4CV81
LinkDB
All DBs
Position
22:complement(164508571..164515202)
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AA seq
304 aa
AA seq
DB search
MSRSSRTLYVGNLPGDIREREVEDLFYKYGPIAHIELKIPPRPPGYAFVEFEEVRDAEDA
IRGRDGYDFDGHRLRVELAHGGRGQSSNDRYGGGGGGGRGQRGGVSRRSDYRVKITGLPH
SASWQDLKDHMRRAGDVCFSQVFRERRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
TIRVKEYDHSRSQSRSRSRSRSYSRGKSGSRSRSRSRSVSRSRSKSKSPKVKSSRRSRSR
SRSVSSRSRSGSKGHFISRSPSRSRSPAPSRPKHLSKSPKRRSPSQSQSRSRSLSRSRSR
GLSS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgatcgagtaggacactttatgttggcaatcttccgggcgatattcgtgagcgt
gaagtggaagatctgttttacaagtatggcccaatagcacatattgagctgaaaattcca
ccaagaccccctggttatgcttttgttgagtttgaagaagttcgtgatgctgaagatgct
attcgtggtcgtgatggctatgattttgatgggcaccgtctgagggttgagcttgcacat
ggcgggcgtggtcagtcgtcaaacgatcgttatggtggtggtggtggtggtggtcgtggt
caacgtggtggagtgtccagacgttctgattatcgagtgaaaattacaggattaccccat
tcagcgtcgtggcaggatctcaaggatcacatgcgtcgagctggggatgtttgtttctcc
caagttttccgtgaacggagggggactactggtattgtggattatacaaactacgatgac
atgaaatatgctatcaaaaagcttgatgactctgagtttcggaatgccttttctcgttca
acaattcgggttaaggaatatgaccacagccgcagccaaagccgcagccgaagccgcagc
cgttcttactccagaggaaagagtggcagtagaagccgtagccgaagtagaagtgtcagt
cgtagcaggagcaaaagcaaatctcctaaagttaaatcttcaaggcgctcaagatctcgt
tcaaggtccgtctcttctcggtcccgttctgggtcaaaagggcattttatctcaagatct
ccatcaaggtccagatcaccagcaccatctcgcccaaaacatttgagtaaaagtccaaaa
agacgcagtcccagccaaagccagagccggagtcgtagtcttagtcgtagtcggagtaga
ggtttatccagttaa
DBGET
integrated database retrieval system
