Nicotiana tabacum (common tobacco): 107823139
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Entry
107823139 CDS
T04643
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107823139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107823139
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107823139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_I
MutS_III
MutS_II
Motif
Other DBs
NCBI-GeneID:
107823139
NCBI-ProteinID:
XP_016505221
UniProt:
A0A1S4CVT0
LinkDB
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Position
Un
AA seq
653 aa
AA seq
DB search
MQRQKSILSFLKRPSSEDQSSGNNKLKFPNQNTVPVTKNIPILGTETPPEKLPRQVLPFN
CGHDGNKSSAFSSIRHKFIREKPRIDRDLVKNDSFGIPSPCTKNEGSERLGNPSISLQSG
SNRSSVSANRNRNQEGKGSVSLIQGDDHGFGPETPSMQPFVPGLKRVQDDMRNSADRSDC
SSLNASKRIKSLEGSNFGGKNLEAEFEMTSKFEWLHPSQIKDANGRMPGDPLYDKRTLFI
PPDALRKMSASQKQYWDVKCKYMDILLFFKVGKFYELYELDAEIGHKELDWKMTLSGVGK
CRQVGISESGIDEAVQKLLARGYKVGRMEQLETSEQAKSRGSTSVIRRKLVHVFTPSTTS
EGNIGPDAVHLLAVKETCNELENGSTTFGFAFVDCAALKVWVGSISDDASCAALGALLMQ
VSPKEVIYDARGLSKDAQKALKKYSLTGSAAPLLSPFQPGADFVDPAEVKNFLDLKGYFK
GSCNKWDHTFDGVRSHDVALCALGSLVNHLERLMLDEVLRNGDILSYEVYRGCLKMDGQT
LVNLEIFNNNADGSPSGTLYKYLDNCVTSPGKRLLRNWVCHPLKDVEKINHRLDVIDRFV
ENSEATLSAAQYLRKLPDLDRLVGRVKASIQSSEALLLPLIGAKILKQRVSPV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcagaaatctatactctccttcctcaagagaccttcatcggaggaccaaagc
tccggcaacaacaaactcaaatttccaaatcaaaatacagtccctgttaccaaaaatatt
ccgattttgggaactgaaactcctcctgagaagttgccacgtcaggttctccccttcaac
tgtggccatgatggaaataagtcttctgctttctcttctattaggcacaagtttatcaga
gaaaaaccacgcattgatcgggatctagtgaagaatgattcttttgggatcccctctcct
tgtacaaaaaatgaaggatcagaaagactggggaatccttctatttccttgcagtcaggc
tctaatagaagttctgttagtgctaatagaaataggaaccaagagggtaaaggatcagta
tctcttatacaaggtgatgatcatggttttgggccggaaacaccaagtatgcagcctttt
gtacctgggttaaaaagagttcaagatgacatgcgtaactcagcggataggagtgattgc
tcttcattgaatgcaagcaagaggattaagagtcttgagggttcgaattttggagggaag
aaccttgaagcagagtttgaaatgactagcaagtttgagtggcttcatccatctcaaatc
aaggatgcgaatggtagaatgccaggggacccactctatgacaagcgaacactgtttatt
cctcctgatgcattgagaaaaatgtctgcttctcagaagcagtattgggatgtcaaatgc
aaatacatggacattctgcttttctttaaagtgggaaaattttatgagctgtatgagcta
gatgctgaaattggtcacaaggagctcgattggaaaatgacactaagtggcgtgggaaaa
tgtagacaggttggcatatctgaaagtgggatagatgaagctgttcagaagctcctagca
cgagggtacaaagtaggacggatggaacagttggaaacatctgagcaagcaaaatctaga
ggctctacttctgttattcgcagaaaactagttcatgtattcactccttctaccacaagt
gagggcaatattgggcctgatgcagttcatcttcttgcagttaaggagacttgcaatgag
ctagagaatggttcaaccacttttggctttgcttttgtcgattgtgctgctctgaaagtt
tgggttggttccataagcgatgatgcatcttgtgcagctttgggggctttgctgatgcaa
gtgtcaccgaaggaagttatatacgatgctaggggtttgtcaaaggatgctcaaaaagct
ctgaaaaaatactcattaacaggttctgcagcaccactcctgtccccattccagccaggt
gctgattttgttgatcctgcagaagtgaaaaatttccttgacttgaaaggttactttaaa
ggatcttgtaataagtgggatcacacctttgatggagtaaggagccatgatgttgcgtta
tgtgctcttgggagtcttgtcaatcatttagagcgattgatgttagatgaggtcttacgt
aatggcgatattctatcatatgaagtctataggggttgcctcaaaatggatggacaaaca
cttgtcaatcttgagatcttcaacaataatgccgatgggagtccatcaggtactttatac
aagtatcttgacaattgtgttacttcacctgggaagcgacttttgagaaactgggtttgt
catcccctcaaagatgtggagaaaatcaaccataggcttgatgtgattgacagatttgtt
gaaaattcagaggctacattatccgctgctcaatatcttcgcaagcttccagatttggat
aggttggttggacgggttaaggctagcattcaatcttctgaagcactcctactgcccttg
attggtgccaaaatattgaagcagcgagtaagtcctgtttga
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