Nicotiana tabacum (common tobacco): 107823199
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Entry
107823199 CDS
T04643
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107823199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107823199
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107823199
Hops complex
107823199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8
RPN1_RPN2_N
Nup54_57_C
zf_RING_Vps8_fungal
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
107823199
NCBI-ProteinID:
XP_016505281
UniProt:
A0A1S4CVY9
LinkDB
All DBs
Position
Un
AA seq
621 aa
AA seq
DB search
MWKVYLDLKEYAAALANCRDALQRDQVYLVQAEAAFAAKEFLRAASFYAKINYVLSFEEI
SLKFISISEQDALRTFLLRKLDNLSKDEKCQITMISTWATELYLDKINRLLLEDDSALDS
NNTEYQSLIKEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYEIVLHHYIQ
QGEAKKALQVLQKPNVSTELQYKFAPDLIMLDAYETVESWMTTKSLNPRKLIPAMMRYSS
EPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKKEDENALLRFLECKFGKGQPG
GPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEADKVEDDE
DLRKKLWLMIAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKE
AICSSLEDYNEQIEKLKQEMNDATCGADNIRNDISALAQRYTVIDRDEECGVCRRKILNV
GGDYRMTRGYMAVGPMAPFYVFPCGHAFHAQCLIAHVTRCTNQAQAEYILDLQKQLTLLC
AESKNVSNGGLSEEPLVSVTPMHKIRSQLDDAVASDCPFCGDLMIQEISLPFIPPEEAEE
SESWEIKPHNHPSQRSLSLAV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagtgtacttggacttaaaagaatatgctgcagctttggctaattgtcgtgat
gccctgcagagagaccaagtttatctggttcaggctgaagctgcttttgctgccaaggag
ttcctcagagctgcatcattctatgcaaaaattaactatgtgttatcatttgaagagatc
tcattgaagttcattagcataagtgaacaggatgcattgagaacatttctcctgcggaag
cttgataatctttcaaaggatgaaaagtgccaaataacaatgatttccacatgggcaact
gaattatatcttgataagatcaatcggctgcttctggaagatgacagtgcattggacagt
aataataccgagtaccaatcactcattaaggagtttcgtgctttcctaagtgactgcaag
gatgtattggatgaagcaaccacaatgaagctactggaaagctacggtagggttgacgaa
ttagtgttctttgctagtctaaaggagcaatacgaaattgtgcttcaccactacattcag
caaggagaagcgaagaaggcgttacaggttcttcagaagcctaatgtttcaacggaactt
cagtacaagtttgcgccagacctcatcatgcttgatgcatatgaaactgttgagtcatgg
atgaccactaaaagtttgaacccgagaaagctcattcctgcaatgatgcgttattcaagt
gaaccacatgcaaagaatgaaactcatgaagtaatcaagtacctggagtattgtgttcat
cgtttacaaaatgaggatcctggcgttcacaatctgttactttccttatacgccaaaaag
gaagatgagaatgctcttctgcgtttcctagaatgcaagtttggtaaagggcaaccaggt
ggccctgaattcttttatgatcccaaatatgcgctacgcctttgcctcaaggaaaagaga
atgcgagcttgtgttcatatatacagcatgatgtctatgcatgaagaagcagttgcacta
gcactacaggttgatccagagcttgcgatggctgaagcagacaaggttgaagatgatgag
gacttgaggaagaagctttggcttatgattgctaagcatgtcattgagcaggaaaaagga
accaaaagggagaatatacgaaaggcaattgcttttctcaaggaaactgatggtctatta
aagattgaggacatcttacccttcttcccagactttgcattaattgatgacttcaaggaa
gcaatttgctcatccttagaggattacaacgagcaaattgaaaaattaaagcaggagatg
aatgatgcaacctgtggtgccgataacattagaaatgacatcagcgctcttgctcagcga
tatactgtcattgatcgggatgaggaatgtggggtttgtcggcggaaaatattaaatgtg
ggtggtgattatcggatgactagaggttatatggctgtaggaccaatggctcccttctat
gtctttccgtgtggtcatgcgtttcatgcacaatgcctgatagctcacgtgactaggtgt
actaatcaagctcaagccgaatacattctggatctgcagaagcaacttactttactttgt
gctgaatctaagaatgtgtcaaatggtggcttgtctgaagaaccactagttagcgtgact
cccatgcataagatccggtcacaactggatgatgctgtagccagtgattgcccattttgt
ggtgaccttatgatccaggaaatttctttgcctttcatccctccagaagaagcagaagaa
tctgaatcgtgggagataaaaccacataatcatcctagtcagagaagcctttccctggct
gtgtga
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