Nicotiana tabacum (common tobacco): 107823315 Help Entry 107823315         CDS       T04643                                  Name (RefSeq) uncharacterized LOC107823315   KO K08873   serine/threonine-protein kinase SMG1 [EC:2.7.11.1] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107823315  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:nta01001]     107823315   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nta03019]     107823315 Enzymes [BR:nta01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.11  Protein-serine/threonine kinases     2.7.11.1  non-specific serine/threonine protein kinase      107823315 Protein kinases [BR:nta01001]  Serine/threonine kinases: Other   PIKK family [OT]    107823315 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      107823315    mRNA cycle factors     Common to processing body (P body) and stress granule      107823315 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PI3_PI4_kinase FRB_dom Motif Other DBs NCBI-GeneID:  107823315 NCBI-ProteinID:  XP_016505426 UniProt:  A0A1S4CWC3 LinkDB All DBs Position Un AA seq 1897 aa AA seqDB search NELYPKLVQDVQLMIKELENVTVLWEELWLSTLQDLHADVMRRINLLKEQAARIAENPTL SHGEKNKINAAKYSAMMAPIVVVLERRFASTSRKPETPHEMWFHEVYKEQIKSAIGTFKT PPASAAALGDVWRPFDNIAASLASYQRKSSVSLGEVAPQLSLLSSSDVPMPGLEKQITVS ESEGGLNTSSSGIVTIASFCEQVAILSTKTKPKKIVIVGSDGEKYTYLLKGREDLRLDAR IMQLLQAVNSSLQSSSAVQSRSVCVRFYSVTPISGRAGLIQWVDNVVSIYSVFKAWQSRV QLAELSALGANAKQTVPPPVPRPMDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLD LMKEAPKQLLYQELWCASEGFKAFSSKLKRYSGSVAAMSIVGHILGLGDRHLDNILMDFC SGDIVHIDYNVCFDKGQRLKIPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVLGVLKKN KDIILMLLEVFVWDPLVEWTRGDFHDDAAIFGEERKGMDLAVSLSLFASRMQEIRIPLQE HHDLLLSTLPAVESGLERFINIMNQYEVISALYRHSDQERSNLVQNETSAKSLVAEATSA SEKIRASLERQARELAQAQAVVMEKAQEATTWIEQHGRALDALRSSSIPDISACIKLSGK EESLSLVSAVLVARVPLTVVPEPTQAQCNDIDREVSHLVTELDHGLSSAISTIQSYSLAL QRILPINYHTSSPIHGWAQVLQLAMNTLSSDILSLSRRQAAELIGKAHADGMDSFKNRYD DLCLKVGQYAAEIERMEEECAELVHSIGPESELRAKNSLLSAFMNYMESAGLERKEDAGQ SGSSDPGGSQDGGWHGNFQETKEKVLSVLKAASSSLYDDVKHKILEKLSHFTRRRHTDIM LCSDLGTFFSEFEEQVEKCMLVAKFLNELMQYVSMDYRSIDTSESLSDSNWTSNFKASLF SCKNLVGQMVEVVLPEVIRSVILFNTEVMDVFASLSQIRRSIDTALEQLIEVEMERASLA ELEQNYFVKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACRAQLDKLHQSWNQK DMRTSSLIQKEATIRSSLVSLEQNLQSMITHEHDKELHLFRSRALLAALMQPFSELEAVD RELSLLGAPVEYGSTGISHLKNLFNSGCPLSEYIWKFPAIWSNHAFFVWKVYIVDSFLDS CTQNIALQADQSLGFDQLVNIVKKKLEVQLQENVEQYLKEKVAPVLITRLEKESEFLKQE TESTEDLTCDQGNNNFAAVRDVRVMLEEYCNAHETVRAAKSAASLMKRQVSELKEAFLKT SFEIVQIEWMHDRNASLLQRRRLISHKYLSSDARLLPVLLNISRPQLLENFQSSIAKIAR SLEGLQACERTSVTAEGQLERAMSWACGGASSTSAGSTVARNPGIPQEFHDHLMRRQQLL CEAREKASDVMKLCISVLEFELSRDGFFQTSEEFYPSRSIADGRTWQQAYVNALTNLDVT FHSFTRTEQEWKLAQSNMEAASSGLFSATNELCVASAKAKSASGDLQSTLLAMRDCSYEL SVALSAFGGITRGRTALTSECGSMLEEVLAVTEGVHDVHSIAKEATALHSSLMEDLSKAN GILLPLESLLCKDVATMTEAMTKEREATKEISPVHGQAIFQSYHVKVEKTYEVFKPLVQS LTISVEGLYSMLTRLAQSASLHAGNLHKALEGLGESQEARSEDLNSYRPDLADQYEGKNE IFSQSDRKSSTDFLDVSGLSLQDKGWISPPDSMTSSSSESAATSSQVSLANSSNGPDLTD PITPHCFDDTERREYSHNVSSVGSALPGLPQPESEKTQETFEMKLLLGNEEPLSSKDKVE EAAHETSFINIEAASRTTRGEDLSTVSVQLLLNVHNV NT seq 5694 nt NT seq  +upstreamnt  +downstreamnt aatgagctgtatcctaaattagttcaggatgtccagttgatgataaaagagcttgaaaat gtaacagtcctctgggaggaattatggctcagcacgcttcaagatcttcatgcagatgta atgaggcgtataaatttgctgaaagagcaggctgcacgaattgcagaaaacccgactctt agccatggagagaagaacaagataaatgctgcaaagtactcagccatgatggctcctatt gttgttgtcctagagcgtcgttttgcttctacttctcgtaaacctgaaacccctcatgaa atgtggttccatgaggtttacaaggaacaaataaaatctgctatcggaactttcaaaacc ccccctgcatctgctgcagctcttggggatgtttggcgaccatttgataacatcgctgca tccttggcatcttatcaaaggaaatcctcagtatcactaggagaagtagcaccacaactg tctcttctgtcatcatctgatgttccaatgcctggtcttgagaagcagattacagtttct gaatccgaagggggacttaatacttcttccagtggaattgtcacaattgcttcgttctgt gaacaggtggctattttatctaccaagacaaaacctaaaaagatcgttatagtaggctct gatggggagaagtacacatatctgttgaaagggcgtgaagatctgcggcttgatgccaga ataatgcagctgctacaagcagttaacagttctctgcaatcatcatctgcagtacagagt cggtctgtctgtgttcgcttctactctgtcacacctattagtggtcgagctggtctcatc cagtgggtggataatgtagtaagtatttatagtgtctttaaggcatggcagagtcgggtc cagctggcagaactttctgcgctaggtgctaatgcaaaacagacagttcctccacctgtt cctcggccaatggacatgttttatggtaagatcatacctgcacttaaggagaaaggcata agaagagtaatatcaagaagagattggcctcatgaagttaaacgtaaggtacttttggat ctgatgaaggaagcccctaagcaacttctataccaggaactttggtgtgcgagtgaggga ttcaaagcattcagctcgaaattaaagagatattcaggtagtgtagcagccatgagcatc gttggccacattctaggccttggggatcgtcatttggataatattcttatggatttttgc tctggggatatcgtgcatatcgattacaatgtctgctttgataaagggcaaagattaaag atcccagaaatagtgcctttccgcctgacccagacaattgaagcagctctaggtttaact ggcatagagggtacattcagagctaattgtgaagctgttcttggtgttctaaagaagaac aaggacataatcttgatgttacttgaggtctttgtgtgggatcctctagtggaatggaca cgtggagacttccatgatgatgcagcaatttttggggaggaaaggaaggggatggatctt gctgtcagcttgagtctatttgcctcccgcatgcaagaaattcgtattcccctgcaggag catcatgatcttctactgtctaccttaccagctgttgaatctggtcttgagagatttata aacatcatgaatcagtacgaagttatctctgctctttaccgtcattctgaccaagagaga tctaaccttgttcaaaatgagacatctgcgaagtcacttgttgctgaagctacttctgct tcagagaaaatccgggcttctcttgaaaggcaggctcgagaattggcacaagctcaagct gtggtaatggagaaagctcaagaagcaacaacttggattgaacagcatgggagggccctt gatgctctaagaagcagttccatcccagatatcagtgcatgcataaagctgagtggtaaa gaagaatctctatctcttgtatctgctgttctagttgccagggttcctttgaccgttgtc cctgaaccaactcaagctcagtgcaatgatatagatagagaagtttctcacttagttact gagctggatcatggactttcttcagcaatatcaactatccaatcgtattctttggctttg caaaggatcttgccaatcaactaccacacctccagtccgatccatggttgggctcaagtt cttcagcttgctatgaatacgctgtcttctgacattttatcactcagccgaagacaggct gctgaacttattggaaaggcacatgctgatggtatggattcttttaagaatagatatgat gatctttgcctgaaagtgggtcagtacgcagcagaaatagagagaatggaagaagagtgt gcagagctcgttcactcaattgggcctgagagtgaattaagagctaaaaatagtctccta tctgctttcatgaactacatggagtctgctggtcttgagaggaaggaggatgctggtcag tcaggatcttcagatcccggaggctcacaggatggtggttggcacggaaactttcaagag accaaggaaaaagttctatcagttttaaaagcagcttctagttctctatatgatgatgtt aagcacaaaatactcgaaaagttgagtcatttcactaggagaagacacacagacataatg ttgtgctctgatcttggaacctttttctctgagtttgaggagcaagtggaaaaatgcatg cttgtagcaaagtttctgaatgaacttatgcagtatgtcagcatggattataggagtatt gacacttctgaatctttatctgatagtaattggacttcaaatttcaaagccagtctgttt tcctgtaaaaacttggtgggccaaatggttgaagttgtccttccagaggtcatcagatca gtaattttgttcaatacggaagttatggatgtgtttgcatcactctcgcaaatcaggaga tctatagatacagcattagagcagcttattgaggtggaaatggagagggcttctttggct gagcttgaacagaattactttgttaaggttggtctcatcactgagcagcagttggctctt gaagaagctgctgttaagggtagagaccacttatcttgggaagaggccgaggaattagcc tctcaagaagaagcatgtagagcacaacttgacaagctccaccaaagttggaaccagaag gacatgcgaacttcatctcttatacagaaagaagcaaccattagaagttctctggtttct ttagaacagaatctgcaatctatgatcactcatgaacatgataaggaactacatcttttc agaagcagagctcttctggctgcactaatgcagcccttctctgagttggaggcagttgat cgagaattgtcattgcttggggcacctgttgaatatggttcaactgggatttctcaccta aagaatttatttaattcaggatgcccgctatctgaatatatttggaaatttcctgccata tggagcaatcatgcattttttgtgtggaaggtttatatagtcgactcttttcttgattcc tgtacacaaaatatagctttacaagctgatcaaagtttgggatttgatcagcttgtaaat atagtgaagaaaaaacttgaagtccagcttcaagaaaatgttgagcagtacttgaaagag aaagttgcacctgttttaataacaagattagagaaagaaagtgaatttttgaagcaagag acagagtcaacagaagatcttacttgtgatcaagggaataataactttgcagctgtaaga gatgtgcgagtcatgcttgaggagtactgcaatgcacatgaaactgtcagagcagcaaaa tcagctgcttccctcatgaagaggcaggtgagtgagttgaaggaggcttttcttaagacc agcttcgaaattgttcagattgaatggatgcatgatagaaatgctagtctgttgcaaaga agaaggctgatatctcataagtatctttcaagtgatgccagacttcttccagttcttcta aacatcagcagacctcaattgcttgagaattttcaatcttccattgcaaaaatagctaga tcgctggaaggcctgcaagcctgcgagagaacttctgtcacagcagaagggcagcttgag agagctatgagctgggcttgtggaggtgcaagctcaacttctgctggaagtactgtggca aggaatccaggaatacctcaggaattccatgatcatctaatgaggcgccaacagttatta tgtgaagctcgagaaaaggcatcagatgtgatgaaactttgcatctcagtattggagttt gaattatcgagagacggctttttccagacttcagaagaattttatccatcgaggagcatt gcagatggcaggacctggcagcaagcttacgtaaatgctctgacaaacttggacgttact tttcattcctttacgcgtactgaacaagaatggaaacttgcacagagcaacatggaggct gcttcaagtggtttattctctgcaactaacgaactctgtgttgcatctgctaaagctaag tcagcatcaggtgatctgcaaagcactctgcttgcgatgagggattgttcctatgaatta agtgtggcactatctgcatttgggggcattacaagggggcgtactgctttgacatctgag tgtggttcgatgctcgaagaggttctggcggtaacagaaggtgtgcatgatgttcacagt atagcaaaagaggcaactgctttgcactcgtctctcatggaagatctatcaaaggcaaat ggcatcctacttccacttgaatctttattatgtaaggatgttgctaccatgactgaagct atgacaaaggaaagagaggcaactaaggaaatatctcctgttcatggacaagctatattc cagtcttatcatgttaaagttgaaaaaacttatgaagtttttaagcccttggttcaatct ctcacaatctctgtcgagggactttattcaatgttgaccaggctagcccaatccgcaagt ctgcatgcaggaaatcttcataaggcacttgaggggttaggagaaagccaggaagcaagg tcagaggatctcaattcctataggccagatcttgctgatcaatatgaaggcaagaatgaa atcttctcccaatcagacagaaaaagcagcacagattttcttgatgttagtggactgtct ttgcaagataagggatggatatctccccctgatagcatgaccagtagcagctcagagtct gcagctacatcatctcaagttagtcttgccaatagttccaatggcccagacttgaccgat ccaattactccacattgttttgatgacacagaaagaagagaatactcacataatgtttcc tcagttggaagtgcacttccaggattgccacagccggaatctgaaaagacacaggagacg tttgagatgaaacttttgcttggaaatgaagaacctttgtcaagcaaagacaaggttgag gaggctgctcatgaaacttcatttatcaatatagaggctgcaagcagaacaaccagaggt gaggatttatcaacagtttctgtccaattattactgaatgttcataatgtctaa

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