Nicotiana tabacum (common tobacco): 107823507
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Entry
107823507 CDS
T04643
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107823507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107823507
03009 Ribosome biogenesis [BR:
nta03009
]
107823507
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107823507
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
U1 related factors
107823507
Complex B
107823507
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107823507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Pox_F16
Motif
Other DBs
NCBI-GeneID:
107823507
NCBI-ProteinID:
XP_016505647
UniProt:
A0A1S4CWY3
LinkDB
All DBs
Position
Un
AA seq
490 aa
AA seq
DB search
MAVVTASSAGPSYAPEDPTLPKPWKGLVDGTTGFIYFWNPETNDTQYERPVPSSHAVSAP
AHKSSVFVSSSVEKPSQGQRYDPDGGHNRGSNNKIARSSSDHFHDGTSVHEGYGSLGVGS
DISQESYCRRNEISVTGGDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIAL
QGRDIVAIAKTGSGKTLGYLMPAFVHLQHRRKNPQLGPTILVLSPTRELATQIQAEAVKF
GKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEA
DRMLDMGFEPQIRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELVA
NKSITQYIEVVLPMEKQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAIH
GDKSQGERDYVLSQFRTGRSPVLVATDVAARGLDIKDIRLVPLNILFDYALLMCSSILMS
NWIRKRWSLY
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtaactgcatcttccgctggtccaagttatgcaccagaagaccctaccctc
cccaaaccttggaaaggcctagttgatggtacgactggattcatctacttctggaatcca
gagaccaacgatacccaatatgagaggcctgttccctcttcccatgcagtgtctgctcca
gcacataagtcatctgtatttgtaagttcatctgttgaaaagccttctcaaggtcaacgc
tatgatccagatggtggacacaacagaggtagcaataacaagattgcaagaagcagttct
gatcattttcatgatggaacatctgtccatgaaggctatggttctctaggtgtaggaagt
gacatatctcaagaatcctactgccgccgcaatgaaatctctgttacgggaggtgatgtt
cctgcacctttgacatcatttgaagcgactgggtttccttcagagattgtgagggagatg
catcaagctgggttttcggctcctactccaatacaggcacaatcctggcccattgccctt
cagggccgtgatatagtggctattgcgaagactgggtctggcaaaactctgggttacttg
atgcctgcctttgttcatctacaacatcgtcgcaagaatcctcaattaggcccaactatt
ttggtactatcaccaacaagagaattagccacgcagatacaagctgaagcagtgaagttt
gggaaatcgtcaaggatatcctgcacgtgtctgtatggaggtgcaccaaaaggtcctcaa
ctacgggagctgagtaggggtgtagatattgtcgtcgccactcctggtcgtttgaacgac
atcttggagatgagaagagttagccttggtcaagtttcttacttggtgttagatgaagcg
gatcgtatgctggacatgggatttgaacctcagataaggaagattgtgaaggaggtgcct
gtgcagaggcaaacactgatgtatacagctacatggccgaagggggttcgtaagattgct
gctgatctattggttaattcagttcaagttaatattggaaatgttgatgagcttgttgca
aacaagtctatcacgcagtacattgaagtcgtgctgccgatggagaaacaacggcgagta
gaacaaatcttgagatccaaagaaccagggtcaaaaatcattattttctgttcaacaaag
aaaatgtgcgaccaactatctcgcaatcttactcgcaattttggagcagccgcaattcat
ggggataaatctcagggtgagagggattatgtattaagccagtttcgcactggcaggtct
cctgtgcttgtggctactgatgttgctgcgcggggtttggacatcaaagatatcaggttg
gtgccgttaaacatactgtttgattatgcattgctcatgtgctcttcaattctgatgtct
aattggataagaaagcgttggtcactgtattag
DBGET
integrated database retrieval system
