Nicotiana tabacum (common tobacco): 107823681
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Entry
107823681 CDS
T04643
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
nta03440
Homologous recombination
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107823681
03420 Nucleotide excision repair
107823681
03430 Mismatch repair
107823681
03440 Homologous recombination
107823681
03460 Fanconi anemia pathway
107823681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nta03000
]
107823681
03032 DNA replication proteins [BR:
nta03032
]
107823681
03400 DNA repair and recombination proteins [BR:
nta03400
]
107823681
Transcription factors [BR:
nta03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107823681
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107823681
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107823681
MMR (mismatch excision repair)
107823681
DSBR (double strand breaks repair)
HR (homologous recombination)
107823681
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
MglC_N
Rhabdo_glycop_CD
BRC-2_C
PGAP1_3rd
Motif
Other DBs
NCBI-GeneID:
107823681
NCBI-ProteinID:
XP_075107697
UniProt:
A0AC58UDX3
LinkDB
All DBs
Position
4:26782610..26786207
Genome browser
AA seq
621 aa
AA seq
DB search
MAKMVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGNRYMFSASDGKMKLKGILQSS
LSSEVISGSIQNLGLIRVLDYTLNDIPTKNEKYLIVTKCDAVSPALEAEYKAEVKSQDNG
IVLKPKQESFKNDVKMEEIGLKPKQEIQTKSAAQIVHEQHGNMAPAARMAMTRRIQPLVS
LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFFDK
FELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSQVEEASNEEAFIPETKFNFVPIDE
LGPYVNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKTVVVSLWNDLAT
NVGQELLDMSDKSPVVAIKSLKVGDFQGVSLSALSKSNIVVNPDLPEAKKLRYWYDSEGK
ETSLASIGSGMSPSTKNGARSMYSDRVSLLHITSNPSLGEEKPVFFSIKAYISFIKPDQT
MWYRACRTCNKKVTDAFGSGYWCEGCQKNDAECSLRYIMALKVFDASGEAWFSAFNEHAE
KILGCSADELDKLKSEEGETAYQMKLKEATWVPHLFRVSVAPQEYNSEKRQRITVRAVAP
VDYAAESKYLLEEMSKMNISI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatggtgagcccagatgccatttcgactattttagcaaacccatcacccgat
tcttcttcagatcttcctgaaattatcgttcaagttgtggatctgaagcccaccggcaac
agatacatgttttcagccagtgatggaaaaatgaaactcaagggcattttgcaatccagt
ttgtcatctgaagttatatctggatccatacagaatctgggtcttattcgtgttcttgat
tacacactcaatgacatcccaacaaagaatgagaagtacttgattgtaacgaagtgtgat
gcagtatctcccgcacttgaagcagaatataaggctgaagtcaaaagccaagataatggc
attgtattgaagccaaaacaggagagtttcaagaatgatgtaaaaatggaagaaattggt
ttgaaacccaaacaggaaattcaaactaaatctgctgctcaaatcgtgcatgaacaacat
ggaaacatggcaccagctgctcgaatggcaatgacaagaagaattcaaccacttgtttct
ttgaatccctaccaagggaattggaccattaaagttcgagtaactagcaagggaaatatg
cggacttacaaaaatgctagaggagaaggctgcgtgtttaatgttgaattaacagatgaa
gatggtacacaaatacaagctacaatgtttaatgaagctgcaaggaagttttttgacaag
tttgaactggggaaagtgtattacatatcaaaaggaactcttagggttgctaacaagcaa
ttcaaaactgtacaaaatgattacgagatgactttgaatgaaaattcccaagttgaggag
gctagcaatgaagaggcttttattccagaaacaaaatttaacttcgtccctattgatgaa
ttaggaccatatgtcaatggcagggaacttgttgatgtaattggagtggttcagagtgta
tctcctacaatgagcataaggaggaagagtaacaacgagacagttccaaagcgtgacata
actattgcagatgagacgaagaagactgttgtggtgtctctttggaatgatcttgctacc
aatgtaggacaagaactactagacatgtctgataaatccccagtagttgcaatcaaatcc
cttaaagttggagactttcagggagtgtctttatcagcattaagcaaaagtaatattgtt
gtgaatccagatttacctgaagccaaaaaattgagatattggtatgactccgaaggcaaa
gaaacttcattggcatctattggttctggtatgagtccctcaaccaagaacggagctaga
tctatgtactctgatagagtctccttgctccacataaccagtaacccatcccttggagag
gagaagcctgtgttcttcagcataaaggcatacataagtttcattaagcctgatcagacc
atgtggtatcgggcatgtaggacgtgtaacaagaaagttactgatgcttttgggtctggg
tattggtgtgaaggatgccaaaagaatgatgcagaatgtagtttgagatatataatggca
ttgaaagtttttgatgctagtggtgaagcttggttctctgcattcaatgaacacgcagag
aaaatacttggatgctctgctgatgaacttgacaagcttaaatctgaggagggagaaact
gcttatcaaatgaaattgaaggaagctacatgggttcctcaccttttccgggtcagtgtt
gcaccacaagagtataacagtgagaaaaggcaaaggataacagtcagggctgttgctcca
gttgattatgctgcagaatccaaatacttgctggaagaaatgtctaagatgaatatttct
atataa
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