Nicotiana tabacum (common tobacco): 107823728
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Entry
107823728 CDS
T04643
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107823728
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107823728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
ARM_TT21_N
PPR_1
NT_N
Motif
Other DBs
NCBI-GeneID:
107823728
NCBI-ProteinID:
XP_016505903
UniProt:
A0A1S4CXN9
LinkDB
All DBs
Position
Un
AA seq
797 aa
AA seq
DB search
MMIISFVQYPMSTALTFLHSLSSSPFHHRHRPRLLSTSSPFSLPLKPLSFSPLSTLPQQV
LFSSHEIQGNNNLDISSSGFPESFNFDESFDSTELKKFETPAVEVSELEDIPDQWRRSRL
AWLCKELPAHKTPTMVRILNAQRKWLKQEDATYIAVHCMRIRENEAAFRVYKWMMQQHWF
RFDFALATKLADYLGKERKHLKCREIFDDIINQGRVPSESTFHILIIAYLSSPGPSELDE
ACNIYNRMVHLGGHKPRLNLHNSLFKALLGKKPGSSKHFLKQAEFIYQNLTSSGLDIHKD
IFGGLIWLHSYQDVVDMERIAVLRAEMRSRGIQESKEVLLSVLRACSKDGDLEEAERTWS
KLLSDDRSPPSQAFVYKMEVYAKNGEPMKSLEVFRRMQKQLSSTSVAAYYKIIKVLSKSQ
RLDLAESIMSEFINSGMKPLIPSFIDLMGMYSIAGLHEKMETTFLRCREVCGPNQTVFNI
YLDSLVHTGNLNRAEEIFNEMRGDVAISLDSRSCNSILRGYLTSGEYAKAEKIYGLMRQK
KYDIEIESSLMEKLDYVLSLREKVVEEPIKLKLTKEQREVLMGLLLGGLQIRSYGERRRR
VHAIHFEFNAESRIHAILKGHIHNEFHQWLGSHDMMVDGTDDIPSSFTTISHSCFTFYAD
QFWPNGRPGIPKLIHRWLSPCVLAYWYMYGGYRTSSGDILLRVKGSREEVLNIVKALKDK
SLDCRVKKRGTVFWIGFLGDNATWFWTVVKPFILGELKDLLKAGGCSNGSLENQRINFYS
GSGSDEKNSDYSDADTS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatgataatttcctttgtccaataccccatgagcacagccctcactttcctccactct
ctctcctcctcccctttccaccaccgtcaccgcccccgcctcttatccacctcatcaccc
ttttcccttcccctaaaacccctttcattttctcccttatccactttaccccaacaagtt
ctgttttcatcccatgaaatccaaggcaataacaatttggacatttcttcatctgggttt
cctgaaagtttcaattttgacgagtcttttgattctactgagctgaaaaagttcgaaaca
ccggccgttgaagttagtgaactagaggacattcctgatcaatggcgtaggtcaagatta
gcttggctttgtaaggaacttcctgcacataaaacacctactatggttcggattcttaat
gcacagaggaaatggcttaaacaagaagatgctacttacattgctgttcattgtatgcgt
attcgtgaaaatgaagctgcttttcgggtttacaaatggatgatgcagcaacattggttt
cgatttgattttgctctagctacaaagctagcagattacttgggtaaggaacgaaagcac
ttgaagtgccgggagatttttgatgacattattaaccagggacgagtgccgtctgaatct
acattccatattctcatcattgcctatcttagttcacctggcccatcagagttagatgaa
gcgtgtaacatctacaatcgcatggtgcacttgggaggtcataagcctcggcttaactta
cacaattctctgtttaaagctcttttggggaagaaaccaggctccagtaaacacttcctg
aaacaggcagaatttatatatcagaatttaacttcctcgggattggatatacacaaagat
atttttggcggtcttatatggcttcacagttatcaggatgtggtggatatggaaagaatt
gctgtgctaagagcagagatgcgatcaagaggaattcaagagagcaaagaggtactcctg
tcagtcttaagagcttgctcaaaggatggggacctggaggaagccgaacgaacttggtca
aaactcctctccgatgatcgtagtcctccttcacaagcttttgtatataaaatggaagtc
tatgcaaagaacggagagcctatgaaatctttggaagtatttaggaggatgcagaaacaa
ctgagttccacctccgttgcagcatactataagataataaaggtgttgtctaaatctcaa
agactagatcttgcagagtctatcatgtccgagttcataaacagtggtatgaagccgctg
attccatcattcatcgatttgatgggaatgtattccattgcaggcttacatgagaaaatg
gagactacctttctccgttgccgtgaagtctgcggtccaaaccagacggtttttaatatt
tatttggattccttggtgcatactggcaatctgaaccgggctgaagaaatcttcaatgaa
atgcgtggtgatgttgcaattagtcttgattctcgttcttgcaacagtattttgagaggc
tatctgacctctggagagtatgcaaaggcagaaaagatatatggtttgatgcgccaaaag
aaatacgacattgagattgaatcttcattgatggaaaaacttgactatgttctaagcttg
cgggagaaagtagttgaagaacctattaagctgaagctcacaaaagaacagcgagaggtt
ttgatggggttgcttcttgggggtttgcaaattagatcatatggagagaggaggaggaga
gtacatgcaatccattttgagttcaatgcagagtcgaggatccacgccattttaaaggga
cacatacacaatgaatttcatcagtggttaggctctcacgatatgatggtggatggcact
gatgatattcctagttcctttactaccatctcacattcttgttttactttctatgctgat
caattctggcccaatggacgtcctggtataccaaaacttatacatagatggctgtcacct
tgtgttcttgcttattggtatatgtatggcggttacaggacatcttctggcgatattcta
ttgagagtaaagggaagtcgagaggaagttttgaatattgttaaagcgctgaaagacaaa
tcattagactgccgagtaaaaaagagggggacggtcttttggattggttttctgggggac
aatgctacatggttctggacagtggtaaagccctttattcttggtgaattaaaggatctc
cttaaagcaggtggctgctcaaatggatccctagaaaaccaaagaatcaatttttacagt
ggttcggggtctgacgagaagaattcagattacagcgatgctgacacgtcatag
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