Nicotiana tabacum (common tobacco): 107823820
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Entry
107823820 CDS
T04643
Name
(RefSeq) protein CHROMATIN REMODELING 25-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107823820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107823820
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107823820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
SWI2_SNF2
DUF7231
Motif
Other DBs
NCBI-GeneID:
107823820
NCBI-ProteinID:
XP_016506013
UniProt:
A0A1S4CXZ5
LinkDB
All DBs
Position
Un
AA seq
959 aa
AA seq
DB search
MEAEEEEEVLSSSERDDSSDEFLCEPDDDIDFESNSGDDDQNVESHAGTSSPDEDRKSQN
VDALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYSSTNEHLARRLCARKRFV
PWGSTRPVLLAITNRLHAPEAAEIDAVEENVELPPGVEALVLWQPEEIVEEGCNLVPIIV
DPLLVKFLRPHQREGVQFMFDCVSGALSTFNINGCILADDMGLGKTLQSITLLYTLLRQG
FDGKPMVRKAIVVTPTSLVSNWEAEINKWVGERVKLVALCESTRDDVVSGIESFINSLSN
LQVLIVSYETFRMHSSKFSNSGSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGT
PMQNDLEEFYAMVNFTNPGILGDAAHFRRYYEAPIICGREPTAVEEEKKLGSDRSAELSS
KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYNHFIHSKNVKRAITEEAKQSKI
LAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMFSGRCGSWTGGSGLWVEL
SGKMHVVARLLAQLRQKTDDRIVLVSNYTQTLDLFSQLCRERRYPFLRLDGTTSISKRQK
LVNRFNDPTKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDGQKK
RVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIDSDIQGNFLSAEDLRDLFTFHDSV
RSEIHEKMSCNRCQPDAVMPDDNPIADFNTQGLQPDQEDIGGFAGVAGCLHALRSSEKQI
GAPKEEDLASWGHHFSPKSVPDVIFQSAAGDEVSFVFSCQVDGKLVPVESTLKPKQEVEN
RELSHFKEKLLKKSNFSSPRRAPSLPTLSSSKQSSEKENSIQKLNLISQAQALSTSTSTP
NEISLSTLPAFFKPLQKPRSKLYRPLEDTKINLKNKLFSENHLPRKRLSPDYINDDDFA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggaggaggaggaggttctttcgtcgtcagaacgtgatgattcgagcgac
gaattcctttgcgagcccgatgatgacatcgatttcgaatctaatagcggcgatgatgac
cagaatgtagaatctcacgcgggtaccagttcgcctgatgaagatcgaaaatcgcaaaat
gttgatgctcttgtgaggggtaatcttattgtgaaaagacaatccctacttccacgagtc
tattcagtgacagatgcagcagccaatctccgaaagccattcaaacctccaagctccaat
ggttacagtagtaccaatgagcatctagcccgtcgtctttgtgctcgtaaaaggtttgtg
ccatgggggtcaacaaggccagtgttgcttgcaattacaaacaggctgcacgctccagaa
gctgctgagatagatgcggtggaagaaaatgtagaactgccacctggtgttgaagctttg
gtgttgtggcagcctgaagaaattgtggaggaaggctgtaatttagtacctataattgtg
gatccattgcttgttaagttccttcgtcctcatcaaagggaaggggtccagttcatgttt
gattgtgtctcgggtgcacttagtaccttcaacattaatgggtgcattttagctgatgat
atgggtttagggaagactctgcaatcaatcactctactttacactcttcttcgccaggga
tttgatggaaaaccaatggtcaggaaggcaatagttgtgacccctaccagtctcgttagt
aattgggaggccgaaatcaataagtgggttggagaaagagttaagcttgttgctttatgt
gaaagcaccagagatgatgttgtgtctggcatagaaagttttattaattcacttagtaat
ttacaggtcttaattgtttcctacgagacatttcgaatgcattcttcaaaatttagtaat
tctggatcatgtgaccttctcatatgtgatgaggctcacagactgaaaaatgatcaaacg
ctgactaatcgagcgttggctgctttagcttgcaagcgccgggttctgctatcagggaca
ccaatgcaaaatgatctagaagagttttatgctatggttaatttcaccaatcctggtatc
ttgggcgatgctgcacactttcggcgttattacgaggcaccaataatttgtggtagggaa
cccactgctgtcgaggaagagaagaaattaggatctgaccgctctgctgaactgagttcc
aaagttaatcagtttattttgaggaggacaaatgcgttattgtcaaaccacctaccacca
aagataatcgaagttgtttgttgcaagttgacacctctccaatcagatctatacaatcat
tttatacattcgaaaaatgtgaaacgagctatcactgaagaagcaaagcaatcaaaaatc
ttagcttatataacagctctgaagaagctttgcaatcatccgaagctgatatacgacaca
atacgaagtggaagtccagggacatcaggatttgaggactgcatccgctttttccctcca
gaaatgttttctggaaggtgtggctcatggactggcggatctgggttgtgggttgaactg
tcagggaaaatgcatgtcgtagcccggctactggctcaacttcgtcagaaaactgatgat
aggattgttttggtttccaactacacacagacgctggaccttttctctcaattatgccgt
gaaaggagatatcccttcttaagacttgatggaactacatcaattagtaaaagacagaag
ctagttaatcgtttcaatgatccaacaaaggatgagtttgcatttctgttgagcagcaag
gctggaggttgtggtcttaatttgatcggtgggaaccgtctggttttgtttgatcctgac
tggaatccagccaatgacaaacaggctgctgcaagaatctggagagatggacaaaagaag
agggtctacatctataggtttttgagtactggaactattgaagaaaaggtctaccaacgt
cagatgtcaaaggagggtcttcagaaagttattcagcaggaacaaatagattctgatatc
cagggaaactttctctcggcagaagacctgcgggacctgttcacatttcatgatagtgtg
aggtctgagattcatgaaaaaatgagctgcaaccgctgccaaccagatgcagtgatgcca
gatgacaacccaatagctgatttcaacactcagggtcttcagcccgaccaagaggatatt
gggggatttgcaggtgtagctggttgtcttcatgcattacgaagctcggagaaacagatt
ggagctccaaaggaagaggacttagccagttggggtcatcatttttccccaaaatccgtg
ccagatgtaattttccagtctgcagcaggagacgaggtttcttttgttttctcttgccaa
gtggatgggaagcttgtgcctgttgaatcaacactaaaaccaaaacaggaggtggaaaat
agagagttgtctcatttcaaagaaaagcttttgaaaaagtccaatttttcatctccacga
cgagcaccatcattaccaacattgtcatcaagcaagcaatccagcgagaaggaaaattca
attcagaaactgaatttgatatcgcaagctcaagcgctgtcaacatcaacatcaactcct
aatgaaatttctctgagtacattacctgcatttttcaaacctttgcaaaagccaagaagc
aagctatatagacctttagaggatactaaaataaacttgaagaacaaactcttttccgag
aatcatttgcccagaaagagattatctcctgattacataaatgatgatgattttgcctag
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