Nicotiana tabacum (common tobacco): 107823939
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Entry
107823939 CDS
T04643
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107823939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107823939
03036 Chromosome and associated proteins [BR:
nta03036
]
107823939
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
107823939
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
107823939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_HPS5
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
ASA1
Beta-prop_RIG_1st
WDR90_beta-prop_4th
RMC1_N
Ge1_WD40
Tricorn_2nd
CFAP251_N
CFAP43_N
WDR54
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
107823939
NCBI-ProteinID:
XP_016506135
UniProt:
A0A1S4CY93
LinkDB
All DBs
Position
21:35681138..35683818
Genome browser
AA seq
454 aa
AA seq
DB search
MDTGYLSSTSASKTRSRCPLQEQLLHRRNSSQNLDRFIPNRSAMDMDYAHYMLTGAKKGK
ENPAVNSPSREAYRKQLAETFNMNRTRILAFKNKPPTPVEAFPSEFSSSVQQAKPAKPRR
HIPQTSERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVSVDEDN
GPVTSVKWAPDGRHIAVGLNNSDVQLWDTTANRLLRTLRGGHRSRIGALDWNNHILTTGG
MDGQIINNDVRVRSPIVDTYQGHHQEVCGLKWSTSGQQLASGGNDNLLHIWDRSMASSNS
TTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGSDRSIKFWNTHTGACVNSIDTGSQVC
ALLWNKNERELLSSHGFTKNQLTLWKYPSMVKVAELTGHTSRVLFMAQSPDGCTVASAAG
DETLRFWNVFGTPEVAKPAPKANPEPFAHLNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggatatttgagttctacatcagcaagtaagaccagatctcgttgccctctt
caggaacaacttcttcacaggagaaattctagtcaaaatttggataggttcattccgaat
cgatcagcgatggatatggactatgcacattacatgttgacaggcgcaaaaaaaggtaag
gaaaatccagctgttaactctccctccagagaggcatataggaagcagcttgcagaaaca
ttcaacatgaacagaactcgtatactggcattcaagaacaagccacccactcctgttgag
gcctttcccagtgaattctcatcatctgttcaacaggccaagcctgctaaaccccgtcga
cacattcctcagacttctgaaaggacactagatgctccggatctagtggatgactactat
ttgaatttattagattggggcagcagcaatgttctttctattgctctaggcagcactgta
tatctgtgggatgcatctgatggtgccacttcagagctggtctctgttgatgaagacaat
ggtcctgttacaagtgtaaaatgggctcctgatggtagacatattgctgttggtctgaac
aattctgatgttcagctctgggacacaaccgcaaatcgactgctgagaactttgagaggt
ggtcaccgatcccgaattggcgctctagattggaacaatcacattttgacaacaggggga
atggacggtcagatcataaacaacgatgtgagagtgagatccccaattgttgacacttac
caaggacatcatcaagaagtttgtggtttaaaatggtcaacctctggacaacaattagct
agcggtggaaatgataaccttctccatatatgggacagatcaatggcttcttccaactct
acaacacagtggcttcacaggcttgaagatcacacagctgctgttaaggcccttgcttgg
tgtcctttccagggtaatttattagcctctggtggtggtggtagtgaccggtccattaag
ttctggaacactcatactggtgcttgcgtgaactctattgatacgggatctcaggtttgt
gccctgctatggaacaagaatgaacgcgagctcctaagttctcatggtttcactaagaat
cagctcactctttggaaatatccttccatggtaaaggtagccgagcttactggtcacaca
tccagagtacttttcatggcacaaagtccagatggttgcacagtggcatctgcagctggg
gatgaaactcttagattctggaatgtatttggaactcctgaagttgcaaagcctgcacca
aaagcaaatcctgagccatttgctcacctgaaccgtattcgatga
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