KEGG   Nicotiana tabacum (common tobacco): 107824532
Entry
107824532         CDS       T04643                                 
Name
(RefSeq) protein decapping 5-like
  KO
K18749  protein LSM14
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107824532
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107824532
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 107824532
NCBI-ProteinID: XP_016506810
UniProt: A0A1S4D049
LinkDB
Position
Un
AA seq 645 aa
MAAATVTATKTADSYIGSLICLVSKSDIRYEGFLFHLDSHDSTIGLRNVKSFGTEGRRTD
GPQVFPSDKIYEFIFFRGSDIKDLQVISSPPPQSTSAVPDDPAIIRSHFPQPIPTAMAST
SPGAATVANVSTSAQPILPVTPFQLNQAHDPLTSGSSLPGSSLPPPPVNISRPAVPNYWP
TLIGSSGGVSHFQQHRFPPPPQSLVASLPLVQQQVQYQNVNASAAGGSNTSAAGVSSFSG
HHHPLLLTGTTSSPNTLPPLLPTPSVQSNPGQFAKLVSHLSSIPMPNNGSSALSSVAAHP
GPKMASPLPEVLNATPPPVTNEPSSVDLTISQTVTSSVETTGVSFSKQSKLSPMTIEEQS
GLKQSSSSQSLQTTHIDAKTAQASVVEPLPSDSTEKTMGSLPKSTTKTLHGSTSSHHYKG
QFAPGRDQAHRDPASTNHSYRGRARGRGYAANGVALSIHQSSRNQAVGRGNEFHLNGVPL
RNHGDAGSHFRGRGAKNSRFKTRFKEDFDFEAMNEKFNKEEVWDLLGKNNKAESDDGNED
DKEMDGVKGEAREVHVRDDSKPVYCKDDFFDSLSCDALDHDSGKVKLSEQRKKDAETFGE
IPKPQRGHGQGPRWAGASQGSYRGRGHGTTRGGRGRGRAVWGRVS
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggcagcggcgacagtgaccgcgaccaagacggccgactcctacattgggagtctcatt
tgtttggtttcaaaatccgatattcgttatgaaggctttcttttccatctcgactctcac
gattccaccattggtcttcgtaacgtgaaatcttttgggacagaaggacgaagaacggat
ggacctcaggtctttccgagtgacaaaatctatgagttcatattcttccgaggtagtgat
ataaaggatctgcaggttatatcttctccaccacctcaaagtacatcagctgttcccgac
gatccggcgattatacggtctcattttcctcaacccatacctacagctatggcctcgaca
tctcctggtgctgcaacagtagcaaatgttagtaccagtgcacaacccattctccctgtt
acacctttccagttgaatcaggcccatgacccattgacatcaggttctagccttccgggc
tcatcgctccctcctccacctgtaaatatcagtcggcctgctgtgcctaattattggcca
acattaattgggtcctcaggaggagtttctcattttcaacagcaccgttttcccccgccg
ccacagagtttggtggcatcactccccctggttcagcagcaagtgcagtaccaaaatgta
aatgcatctgcagctggaggatccaacacatctgcagctggagtatccagcttttctgga
caccatcatcccttgctgctgactggtactaccagctccccaaatacactgcctcccttg
ctgccaacaccttctgttcaatccaatcccgggcagtttgctaaactggtgtctcatttg
tcatctattccaatgccaaataatggatctagtgctctttcaagtgtagcagcgcatcct
ggcccaaaaatggcatctcctttgccagaagtacttaatgctactccgcctccagtaact
aatgaaccaagttcagttgatctgacaatctctcagactgtaacatctagtgtagagaca
actggtgtatctttcagcaagcagtcaaaactatctcccatgacaattgaggaacagtca
ggactgaaacagtcctcttcgtctcagtcactgcagaccacacatatcgatgcaaagact
gctcaagcatcagtggtggaacctctgccatcagatagcacagaaaaaaccatggggtca
ttgccgaaatccacaactaaaactttgcatggatctacttcatctcatcattataaaggt
cagtttgctccgggaagagatcaggcgcatcgagaccctgcatccactaatcatagttat
agaggccgtgcacgaggaaggggatatgcggcaaatggagttgctttatccatacatcaa
agctcaagaaaccaggcggttggaagaggaaatgagttccacctaaatggtgttccgttg
cgcaatcatggcgatgcgggaagtcattttcggggacgtggagctaagaattcccgtttc
aaaacaagatttaaggaggattttgattttgaggcgatgaatgaaaagttcaataaggaa
gaggtgtgggacttacttggcaaaaataacaaagctgaatcagatgacggaaatgaggat
gacaaagagatggatggtgttaagggtgaagccagagaagtacatgtaagagacgatagc
aagcccgtttactgtaaggatgacttttttgattctctttcttgtgatgcacttgatcat
gattctgggaaagtgaagctctctgaacaaaggaaaaaagatgctgagacatttggagag
atcccaaaacctcaacgaggtcatggacagggaccacgctgggctggggcatctcaaggc
tcatatcgtggcagaggacatggcactacacgaggtggtcgcggtcgtggaagagcagtt
tggggccgtgtcagttaa

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