Nicotiana tabacum (common tobacco): 107824795
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Entry
107824795 CDS
T04643
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107824795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107824795
03051 Proteasome [BR:
nta03051
]
107824795
Membrane trafficking [BR:
nta04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107824795
Proteasome [BR:
nta03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107824795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
107824795
NCBI-ProteinID:
XP_016507086
UniProt:
A0A1S4D120
LinkDB
All DBs
Position
Un
AA seq
549 aa
AA seq
DB search
MSMVGGDSNKENSTGAGEGVTINVRCSSGSKFSVKVNLDSTVGSFKSILVQHANIPAENQ
RLIYKGRILKDEQTLESYGLEADHTVHLVRGSGPAPSANPASSTNAGGPNTDQHAPRDAA
SNVDGPFPGSGLGASLFPGLGSGGGGGGLFGAGLPDFEQVQQQLTQNPNMMRDMLNMPLV
QNLMNNPETIRNLIMNNPQMREIMERNPELSHVLNDPVTLRQTMEAARNPELMREMMRNT
DRAMSNIESSPEGFNMLRRMYENVQEPLLNATTLSGDTRNDVGSNPFAALLGAQGGGQGR
HQSNNPPTSGSETTDNPPAPNTNPLPNPWASAGTGAAQANTTARSNTAADTRAAPLGGLG
GLASPGLEQMLSGMPDTTSLNQMMQNPEISQMMQSLLSNPQYMNQVLGLNPQLRGMLDSN
SHLREMMQNPEFIRQLTSPETMQQLMTFQHGLLSQAWRQQTNQQLGQNAGGAAVDNGMEM
LMNMFGGLEAGVLGVPNRSNVPPEELYATQLTQLQEMGFFDTQENIRALIATAGNVHAAV
ERLIGNSGQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggtcggcggcgattcaaacaaggagaatagcaccggcgccggcgaaggcgtt
acaatcaacgtccgatgttccagcggctcgaaattctccgtgaaagttaacctcgattcc
accgtaggatccttcaagtctattcttgtacagcacgcaaacattcctgctgaaaatcag
agattgatctataaaggccgcatcttaaaagacgagcaaactctcgaaagttacggtctg
gaggcggatcacactgtgcatttagttcgaggttccggcccagctccctctgcaaaccct
gcaagttcaaccaatgctggaggtccaaatacagatcagcatgcaccaagagatgctgct
tctaatgtagacgggccatttccgggatcaggccttggagcttcactgtttcctggtctt
ggaagtggtggtggtggtggtggtttgtttggagctggacttccagattttgagcaggtc
cagcagcagttgactcaaaaccccaacatgatgagagatatgttgaatatgcctcttgtc
cagaatttaatgaataaccctgaaaccattcgcaacttgatcatgaataatccccaaatg
cgagagatcatggagcgtaatcccgagctttctcacgtactcaatgatcctgtgactctt
cgacagacaatggaggctgcacgaaaccctgaacttatgcgtgagatgatgcgcaatact
gacagggccatgagcaatattgaatcttctcctgagggatttaacatgctgaggcgtatg
tatgaaaatgtccaagagccactcctaaatgcaacaacattgtctggagatacgagaaat
gatgtggggtctaacccgtttgcagctcttttgggagcacaaggtggtgggcaaggcaga
catcagtcaaataatcctccaacttccggttctgagacaactgataatccgcctgctcct
aatactaatccacttcctaatccttgggcatctgcaggcactggagctgcccaagccaat
accactgctaggtcaaatactgctgccgatactagggctgcaccacttggtggcttaggt
ggacttgcttccccaggtttggagcaaatgctaagtggcatgccagataccacttctcta
aatcaaatgatgcagaaccctgagatctcacagatgatgcaatctctcctctcaaatcct
cagtacatgaaccaggttttagggctgaacccacagctaagaggcatgctcgattccaac
tcccatcttagagaaatgatgcaaaatcctgagtttattcgccaattgacatcacctgag
actatgcagcaacttatgacttttcagcatgggcttttgtctcaagcttggcggcagcaa
acaaaccaacaactgggccaaaatgctggtggagcagcagttgacaatggaatggaaatg
ctgatgaacatgtttggtggacttgaggcaggggtcttgggtgtccctaacagatctaat
gtgcccccagaggaactatacgctactcagctaacccagttacaagaaatgggtttcttt
gacactcaagaaaatatccgggcactgattgccactgcaggcaatgttcatgctgcagta
gagcgacttattggaaattctggacagtag
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