Nicotiana tabacum (common tobacco): 107824932
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Entry
107824932 CDS
T04643
Name
(RefSeq) endoribonuclease Dicer homolog 3a-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107824932
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107824932
microRNA pathway
RISC loading complex
107824932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
Helicase_C
PAZ
SWI2_SNF2
dsrm
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
107824932
NCBI-ProteinID:
XP_016507236
UniProt:
A0A1S4D1G8
LinkDB
All DBs
Position
Un
AA seq
1610 aa
AA seq
DB search
MEKKKENPLKRNFEDLCSEDEQMAVEKKQKEDFIPRDYQLEVYEVAMRRNTICVLETGAG
KTYIAVMMIREISKTLRTGDEKKFIVFLAPTVHLVHQQYEVIRHHTQLAVQEYYGAKGVD
DWNAEKWKTETDDNDVLVMTPQIFLDALRKGYIKFGRVCFLILDECHRASGKHPYKMIMT
EFYHQSTRTSKVFGMTATPVTRKGVSSSTDCEEQISELESLLDSQIYATEERVGLGEFVP
SAKETCKFYDPIVSSNLEIKAKLEASWSKFDAALVDLQLSVSSQYKDTDDNYMKLRKRLS
NFYAKILCCLENLGIICAYEAVTVCLGNVPDDKEENEILRKSSLQQRYFLEEALSIIQES
MPQDCESLLDVGYDSSATLSMGLISSKLHVLLEIFKSLRKATQVRCLVFVERIITAKVIE
RVMKTMTWFSDFTIAYLTGTNTSVDALTPKVQKETLECFRSGKVNLLFATDVVEEGIDVP
HCSSVIRFDLPKTVRSYVQSRGPARQTESLYILMLERGNMKHREQMFDIIRSEYSVTDTA
IKRDPDVCVVKPCLVKETNAYYVEATGASVTADSSVSLLNKYCEMLPGDKFFSPKPNFEY
ILSGDLYQCKLTLPTNAAFQTMVGPECRNIQLSRQLVCLDACKKLHQIGALNDHLLPLNE
KPSKSDLHVQDKHVGAGTTKLKELHSTAHISALSGTWGYDPNGEVFQAYKMNFSCNIPEV
NYSSFVLLLQSELDDDVGNVEVELFLVSKFVQSSVSHCGKLHLDAQQVAKAKLFQELFFN
GVFGKLFVKSSGGRKFLLETDESLWEPSNMYLLLPLDPLDSSCEPCRIDWGGIESSVSVV
KFLKRNAWLNAEQSETTRKNSLVDRTAAFMVDLDQTDLIHFANMSVCRSKLKDMVVVAIH
TGRIYSVLDAVVNTSAESPFEVNSEATQSPFSSFADYFHKKYGIVLLYPGQPLLLLKQSH
NAFNLLVDFQKEGVSCGTNSKDSKMVVQKPLNNVHMPPELLVGIDIRIDILKSFYLLPSL
MHRLESLMLASELRKEITSHSGDLHISSSLILEALTSLRCNESFSMERLELLGDSVLKYA
VSCHLFLKYPKKHEGQLSDRRSWAVCNSTLHKVGTSRHLQGYIRDGAFDPRRWTAPGQLS
LRLCPCDHGVETSEVPLDKKFLTEDPKVVVGKHCDRGHRWMVSKTISDCVEALIGAYYVG
GGFIAALKLMKWLGVEAELEPSLVEDAIKTASLYSYTPKAKDIEDLELKLTYKFSVKGLL
LEAITHATVLEVDVSYNYQRLEFLGDSVLDILITWYLYQKHKDIDPGELTDLRSASVNND
NFAYAAVKRELHVHLQHHSGYLESEISAFVKLVSVSCSLQGNKAPKVLGDLVESIAGAIL
IDTKLNLDEVWKIVKPLLSPIVTPDKLELPPLRELIELCDSLGYFLKDHCMVKGDTVHAE
LRLQLKDELLVAEGCGQTRKNAKGQAALKLLKDLEYKGISSKKKKQETSLVDVPHSLGSD
GDICSQANNTCPAMAPCKKQKTILLKLETAKAQPSSACNSNKDIQAIGPINMKKGGPRQS
LYELCKKLQWPMPSLESTERKSKSLIECGEGSDKRKVYNTFASQISLTIP
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagaaagaaaacccattgaagagaaactttgaagacttatgtagtgaagat
gaacaaatggctgtagagaagaagcagaaggaagattttattccaagagattaccaattg
gaggtatatgaagtggcaatgaggaggaacactatatgtgtattggaaactggggctgga
aagacatatatagcagtgatgatgatcagagaaattagtaaaacattgaggactggtgat
gagaagaagtttattgtattcttggcacctactgttcatcttgttcatcagcaatacgag
gttatacgacatcatacgcagcttgcggttcaagaatactatggggccaaaggagttgat
gactggaatgcagaaaaatggaaaaccgaaactgatgataatgacgttttggttatgaca
ccccaaattttcttggatgcactgagaaagggttacataaaatttggtagagtgtgcttt
ctgatactagacgagtgtcatcgtgccagtggtaaacatccctataaaatgattatgacg
gagttctatcatcaatccacaagaacatcaaaggtttttgggatgactgctacccctgtg
actagaaaaggtgtttcatcttcaacagactgtgaggagcaaatatcagaacttgaaagt
cttcttgattcccagatatatgcaacagaggagagggtggggctgggcgaatttgttcct
tccgcaaaggagacttgtaaattctatgatccaatagtgtcttcgaatttagaaataaag
gcaaaattggaagcttcatggtcaaagtttgatgctgcattagttgacttgcagctgtca
gtatcaagtcagtacaaagatacagatgacaactatatgaagcttcggaagagattatcc
aatttttatgcaaagatattgtgttgccttgaaaatctaggcatcatatgtgcgtatgag
gctgttacagtctgtttgggaaatgtccctgatgacaaagaggaaaatgagattcttagg
aaaagttctctccaacagagatacttcttggaagaggcattgtcaattattcaggaatca
atgccacaagactgtgagagtcttctagatgttggatatgactcgtcagctacactgtca
atgggccttatatcttcaaaactgcatgtgcttcttgaaatttttaaatcccttaggaaa
gctacacaagtacgctgtctcgtttttgtcgaaagaattatcacagctaaagtaattgaa
agagttatgaagacaatgacctggttttcagatttcacaatagcatatttgactggaaca
aacacatcagttgatgcactgacaccaaaagtgcaaaaagaaaccttggaatgttttcgc
tctggaaaggtcaatttattatttgctactgatgtggttgaggagggaattgatgtgccg
cactgttcttctgtgatacggtttgatttaccaaaaacagttcgaagttatgtccagtct
aggggaccagctcgtcagactgaatctctgtatatactaatgcttgagaggggaaacatg
aagcacagagaacagatgtttgatatcattaggagtgaatattctgtgacagatacagct
ataaaaagagaccctgatgtttgtgttgtgaaaccttgtctagtgaaggaaactaatgca
tattatgtggaggcaactggagcttcagtaactgcagattctagtgtcagtctcttgaat
aaatactgtgaaatgctgcccggagataagttcttctctccaaagcccaattttgagtac
atcttgtctggggacttgtaccagtgtaaattgacgttacctacaaatgcagctttccaa
acaatggttggtccggaatgcaggaatattcaattgtcaagacagctcgtctgcttggat
gcatgtaagaagctgcatcagataggtgctctgaatgatcatcttcttcctctcaatgaa
aagccttccaaaagtgatttgcatgtgcaggacaaacatgtaggggcaggaacaacaaag
ttgaaagaattacacagcacagctcatattagtgcattatccgggacatggggatatgac
cctaatggagaagtatttcaggcgtataaaatgaacttctcttgcaacataccagaagtg
aattattccagctttgtccttttgcttcaatcagaactagatgatgatgtgggaaatgtg
gaagttgaactcttcttagtctccaagtttgtccaatcatctgtgtcgcattgtgggaaa
ctccatttggatgctcaacaggtggcaaaagcaaaactcttccaagaactattctttaat
ggggtgtttggtaaattgtttgttaaatcatcgggtggaaggaaatttctacttgagaca
gatgaatctttatgggagccatcgaacatgtacttgctactaccactggatcctttagat
tcaagttgtgaaccttgtagaatagattggggaggaattgaatcttctgtgtcagttgtg
aaatttttgaaaagaaatgcttggttaaatgctgaacaatctgaaactacccggaagaat
tccttagttgataggactgcagcgtttatggtagatctcgatcagacagatttgattcac
ttcgccaatatgtcagtctgtagaagcaagcttaaggacatggttgttgtggccattcat
actggaagaatctattctgttctggatgctgttgtcaatacttctgcagagagccccttc
gaagtaaattcagaagctacccagtcacccttttcatcatttgctgactacttccataaa
aagtatggaattgttttactgtatcctggacagcctttgttgctgctaaagcaaagccat
aatgcattcaatcttcttgtggattttcaaaaagaaggcgtttcctgtggaacaaattca
aaagatagtaaaatggtggtccagaagccgctgaataatgttcacatgccaccagaactt
ctggtgggtatagatattcggatagacatcttgaaatccttctacttgctgccctcatta
atgcaccgtctggagtccctgatgttggctagcgagttgaggaaagagataacaagtcat
tcaggcgatttacatatatcaagctcattgattctggaagctcttactagtctaagatgc
aatgagagtttctccatggaacgtctggaattgcttggagactcggttctgaagtatgct
gttagttgtcacctcttccttaaatatcccaagaagcatgaagggcagctatctgatcgg
cgttcatgggctgtttgtaactcaaccctccataaagtgggaactagtcgccatttgcag
ggctatataagggatggagcatttgatccacgccgatggactgctcctggacagctttcc
cttcggctttgtccttgtgaccatggggttgagacgtcagaagtgcctttggacaagaaa
tttttgactgaagatcccaaagtagtagttgggaagcactgtgatagaggacatagatgg
atggtctcaaaaacaatatctgactgtgtcgaagcgctgataggtgcatactacgttggt
ggtgggtttattgctgccctgaaattgatgaaatggcttggtgttgaagctgaacttgaa
ccttcattagtagaggatgcgatcaaaactgcatctctttactcctatacccctaaagct
aaagatattgaagaccttgagttgaagcttacctataaattttctgtcaagggattgcta
ctagaagctataacacatgctactgtgctagaagtggacgttagttacaattatcagaga
cttgaatttctcggcgactcagtactggacattctcattacctggtacctttaccagaag
cataaagatattgatcctggggaactgacagatttgcgctctgcttctgtcaataatgat
aattttgcttatgctgctgtgaagagggagcttcacgtccatcttcaacatcactctgga
tatcttgaaagtgaaatatcagcatttgtgaagttggtctctgtttcttgttcactccaa
ggaaacaaagccccaaaggtacttggagacttggtggagagtattgctggagcaatactt
attgatactaagcttaacctggatgaagtttggaagatcgtcaagccactattatctccc
atcgtgactcctgataagctcgaactacctccgttgcgtgagctcatagaattgtgtgac
tctcttggctacttcttgaaagaccattgcatggtgaagggggataccgtgcatgcagag
cttaggttacagctgaaagatgagttgctggttgctgagggatgtggacaaactagaaaa
aatgcaaaggggcaagcagctctgaaattattgaaggacttagagtataaaggaatttca
tccaagaaaaagaaacaagagaccagccttgttgatgtgccacattctttaggctctgat
ggtgacatctgcagccaagcgaataatacatgtcctgctatggctccatgcaaaaagcaa
aagacaatacttttgaaattagagacggccaaagctcaacctagcagtgcttgtaattca
aataaggacatccaagcaattgggccaatcaacatgaaaaagggtggaccacgtcaatca
ctttatgaactgtgcaaaaaactgcagtggcctatgcctagtttggagtcaacagagcgt
aaatccaagtcactgattgaatgcggcgaagggtctgataaaaggaaggtttacaacact
tttgcatctcaaatctcgttgaccataccc
DBGET
integrated database retrieval system
