Nicotiana tabacum (common tobacco): 107824988
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Entry
107824988 CDS
T04643
Name
(RefSeq) putative helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107824988
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107824988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
107824988
NCBI-ProteinID:
XP_075094882
UniProt:
A0AC58TCC1
LinkDB
All DBs
Position
19:140669273..140685766
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AA seq
814 aa
AA seq
DB search
MGLGKTLQAISLLSYLKFYLKTPGPFLVLCPLSVTDGWMSEMANFAPKLRVLSYIGEKEH
RRNLRKKMYEHVNKKALSDGESLSFDVLLTTYDILLLDEDFLSQVPWSYAIIDEAQRLKN
PSSVLHNVLKEHFVMPRKLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFLYAFKEAGD
PSCRDADKAKEQFKILKYVIGAFMLRRTKSQLIELGTLVLPPLTEITVMAPLVALQKKVY
MSILRKELTQLLALASGAPSTRSLQNMVIQLRKACSHPYLFAGIEPEPYEEGEHLVQASG
KLLILDHLLQKLHAYGHRVLLFAQMTQTLDILQDYLELRKYSYERLDGSIRAEERFAAIR
SFSQHSAKRRSKLEADQNGAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQALQR
AHRIGQTNHVLSINLVTEQTVEEVIMRRAQRKLQLSQNIVGDDVLDQEGKEMAGAEAGDL
RSVILGLHMLDPAEITNEESDEFDRTELTAMAETIIGFRNEERSAKDEFEVKPVDRLSEF
NVVTKRGPESIKLDPRLDEASYLAWVEKFKEASQANHGPIFELGSRRSLPEKKHLKTEAT
KRKEEEEKLSKWEALGYHSLSVRYPVSAPDTDISSDSGAVHFVYGDCTHPSKVSPSEPTI
IFSCVDTSGSWGHGGMFDALARLSTSVPATYERASEFHDLHLGDLHLIEITEDLTSGSDS
PHAPQWVALAVVQSYNPRRKVPRGSISIPDLEHCLSKASYSAAQKSASIHMPRIGYQDGS
DRSEWYTIERLLRKHAALYGINIFVYYFRRSAQS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggggctggggaagactttgcaagctatatcattgctgagctatctgaaattctaccta
aagactcctggaccattcttggtgctctgtcctcttagtgtgacggatggttggatgtct
gaaatggccaatttcgccccaaaattaagagtgctatcctatattggagaaaaggagcac
cggcgcaatctacgtaagaaaatgtatgagcatgtgaacaagaaggcgttgtctgatgga
gaatcattatcttttgatgtgctgttgactacatacgacatattattacttgatgaagat
ttcctatcacaggttccatggagttatgcaataattgacgaagcacaaaggctcaaaaat
ccatctagtgtgctgcataatgtgctcaaagagcattttgttatgccaaggaaattgctg
atgaccggcacacctatacaaaacaacctttcagagctttgggctctgttgcatttctgt
atgccttctgtttttggaacactggatcagtttctctatgcattcaaggaagctggagat
ccttcatgtcgtgatgcagacaaagctaaggaacaattcaaaattttgaaatatgtaata
ggggcatttatgctccgaagaactaaatctcagcttattgagttggggactcttgtactg
ccacctcttactgagattactgtgatggcaccattggtggccctgcaaaagaaggtatat
atgtccatattaaggaaggagctaacacagctgctagcacttgcttctggagcacccagt
actcggtcgttacagaatatggtaattcaactacgaaaagcatgcagtcatccttacctt
tttgctggtatagaacctgaaccatatgaagagggagaacacctggttcaggctagcggg
aaattgcttattttggatcatcttcttcaaaagcttcatgcctatggacatagagtcctt
ctgtttgctcagatgactcaaacactggatatattgcaggattatctggaattgaggaaa
tattcttacgagcgtcttgatggttcaattcgcgcagaagagcgcttcgctgcaataagg
agcttcagtcaacactcagccaagcgaagatcaaagttggaagctgatcaaaatggagca
tttgttttcttgatttcaacaagagctggtggagttgggttgaatcttgtggctgctgat
actgtcatattttatgagcaagactggaatccccaggtagacaggcaggccttgcagcgt
gctcaccgaattggtcaaacaaaccatgtgttatctataaatctagtcacagagcagacg
gtggaggaggtcattatgcgtagagcgcaacggaaattacagcttagccagaatattgta
ggagatgatgtcttggatcaggaagggaaagagatggcaggtgctgaagctggtgacttg
cgatctgttatacttggattgcatatgctagatcctgcagaaataaccaatgaggaatca
gatgaatttgataggactgagttgactgcaatggcagaaacgattattggatttcgcaat
gaagaacgttctgctaaagatgagtttgaggtaaagccagttgacaggttaagtgagttc
aatgttgtcacaaaaaggggtccagaatctattaagcttgatcctcgtcttgatgaagct
tcatatctcgcatgggttgagaaattcaaggaagcatcacaggccaaccatggtccaatt
ttcgagcttgggagtaggagaagcttgcctgagaaaaagcatctaaaaactgaagcaaca
aagagaaaggaagaggaggagaagttgtcaaagtgggaagctcttggataccactcatta
tctgtcagatatcctgtatcagctccggatactgatatctcctcagattccggcgctgtt
cattttgtttatggggactgcactcatccttctaaagtgtctccatcagagccgaccatt
atattcagctgcgttgatacatccggaagctggggtcatgggggtatgtttgatgcattg
gcgagactatcaactagtgtacccgctacatatgagcgagcttctgaatttcatgatctt
catctaggtgatctccatcttatagagattacagaggatctcactagtggcagtgattca
cctcatgctcctcaatgggtagctttggctgttgtgcagtcctacaatcctaggcgcaaa
gtcccacgtggcagtatctccatccctgatttggagcattgtctatcaaaagcatcatat
tcagctgctcaaaagtctgcatcaatccacatgccaagaattggttatcaggatggttct
gacaggtcagaatggtatacaattgaacgtctgctgcggaagcatgctgctctctacggc
ataaatatctttgtgtattatttccggcgttcagcacagagctaa
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