Nicotiana tabacum (common tobacco): 107825675
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Entry
107825675 CDS
T04643
Name
(RefSeq) recQ-mediated genome instability protein 1-like
KO
K10990
RecQ-mediated genome instability protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107825675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107825675
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107825675
FA (Fanconi anemia) pathway
107825675
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
107825675
NCBI-ProteinID:
XP_016508043
UniProt:
A0A1S4D3X9
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Position
21:complement(84554697..84562589)
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AA seq
638 aa
AA seq
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MSRRRLQIICSSDEEDDEPQQLLNNNEENENPNNNNNNIEIEILESSTNLQSVTLSSSST
PNPTPNHHEPPNVDVVDAAVAVAADCSIGRVLEGLGLRLRRDWLESCVRGLEGSVREFTQ
LDDNAKAKFCFEQFLYSDMNYCGAGWLPRDVHKLHLVDLKGPFVLQVDEIVNISCPLRDR
YQKAAAGIKRCLKLSMTDGIQHVFGMEYRPIKDLDVLAPSGLKVAICNVHVRHGLLMLVP
EVIEVLGGMVEELEQARQRLVNEINKPPRGKRTRTGVVPPLATRATNAAWPPEGVTAPEH
TDTASRESSIPFQVHQQGTAFGIATSAAEEIRAIYRENAEPGLPSAATITTPVNRRDAEP
NFPSTAAVSVPFNMKDTGPSFSSDAASLAEDIPMVDMATEDIDVPIRREHNEPILLSSSP
MEVEEFLSDGRNSPAAPASGRSRESVPVSLTGHNVDTEPDLVDELELPIILSGDNENPFT
YLASLSAKQAGMNGSASTVTGKIKCFLTGVKGFQYRQRSKYELRAYVDDGSLISEILIDH
DVVQKEIGFSPAEVTTALDSSDGKRISHMKETLKRFQKFLVNFEGTMLVQLNEESPIPVA
IEMNQGCPASDAWLLLKRLKPATSQPHHLHPETINLSP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagacgcctccaaatcatctgttcctccgatgaagaagacgacgaacctcaa
caactgctcaacaacaacgaagaaaacgaaaaccctaacaacaacaacaacaacatcgaa
atagaaattctagaatcttctactaacctccaatccgtaaccctaagttcctccagtacc
ccaaaccctacacctaaccaccacgagccaccaaacgtcgatgttgttgatgccgccgtt
gctgtagccgcggattgtagtattggtagggtattggaagggctagggttaagattacgg
agggattggttagaatcgtgtgttagagggctcgaaggatcggttcgagagtttacgcaa
ttggatgataatgcgaaggcgaagttttgtttcgagcagtttttgtactcggatatgaac
tattgtggcgcggggtggcttcctagggatgtgcataagttgcatttggttgatcttaaa
ggaccttttgtacttcaggtagatgagattgtgaatatcagttgtcctcttcgagatagg
taccagaaagcagctgctggaataaagaggtgtctgaaattgtccatgactgatggcatt
cagcatgtgtttgggatggagtacaggcctataaaagatcttgatgttctggctccttca
gggttgaaggttgctatctgtaatgttcatgttaggcatggacttctgatgttggtccct
gaagtaattgaagtcctgggcgggatggtggaagagttagaacaagcaagacaacggcta
gttaatgaaataaataagccaccaagggggaaaagaacgaggactggagtggtgcctcct
ttggcaactagggctactaatgctgcttggccaccagaaggtgttactgctccagagcac
actgatactgcctcaagagaaagcagtatcccttttcaggttcatcagcaaggaacagcg
tttggcattgctacttctgcagcagaagaaattcgtgccatttatagggaaaatgcggaa
cctgggctaccatctgcggcgacgattaccactcctgttaacaggagagatgctgaacct
aattttccatctactgcagctgtttctgtccccttcaatatgaaggataccgggcctagc
ttttcatctgatgcagctagtcttgctgaggatattcctatggttgacatggccactgaa
gacattgatgttccaattagaagggaacataatgaacctatccttttgtcttcttccccc
atggaagtggaggaatttctttcagatggtagaaatagccctgccgcacctgcaagtggc
aggagcagagaaagtgttcctgtctctctcacgggccataatgtagatacagagcctgat
ttggttgatgagttggaacttccaattatactttctggagacaatgaaaaccctttcact
tacttagctagtctgtctgctaagcaggctggtatgaatggcagtgcttccaccgttaca
ggaaaaattaagtgctttctcactggtgtgaagggctttcagtatagacagaggagtaaa
tacgagcttcgggcttatgttgatgatggcagcctcatctctgagatccttattgatcat
gatgttgtgcagaaagaaataggtttttctcctgcagaggtaactactgctcttgattct
tcagatggcaaacgaatcagtcacatgaaggagacactgaaacgttttcagaaattcttg
gttaattttgagggaacaatgcttgtacagttgaacgaagaatccccaattccagttgct
attgaaatgaaccaggggtgtcctgcctctgatgcatggttgcttctcaaaagactaaag
cctgctacttcacaaccgcatcatcttcacccagaaaccatcaatttatccccttga
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