KEGG   Nicotiana tabacum (common tobacco): 107825761
Entry
107825761         CDS       T04643                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    107825761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nta03400]
    107825761
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     107825761
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II ATG17_like
Other DBs
NCBI-GeneID: 107825761
NCBI-ProteinID: XP_016508157
UniProt: A0A1S4D417
LinkDB
Position
Un
AA seq 862 aa
MNENLEEQSKLPELKLDAKQAQGFLSFFKTLPKDPRAVRLFDRRLVVPSELGRWCSKLSF
FPGTYINXALAPNFGQNGCEVGLGYVDITKRVLGLTEFLDDSHFTNLESALVALGCRECL
VPAETGKSSEYRPMFDAISRCGVMVTERKKTEFKGRDLVQDLGRLVKGSVEPVRDLVSGF
ECASGALGCILSYAELLADESNYGNYTVKQYSLSSYMRLDSAAMRALNVMESKSDANKNF
SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVEEINCRLDLVQSFVEDAALRQDLRQHLKRI
SDIERLTHNLERKRASLVHVVKLYQSSIRVPYIKSVLERHDGQFATLIRERYIDSLEKWS
DDNHLNKFIGLVETSVDLDQLENGEYMISSAYDPNLSALKDEQETLERQIHNLHKQTAND
LDLPVDKSLKLDKETQFGHVFRITKKEEPKVRKQLNSHYIVLETRKDGVKFTNTKLKKLG
DQFHKIVEEYKSCQKELVARVVQTAASFSEVFEGIAGVLSELDVLLSFADLAASCPTPYT
RPNISPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIITGPNMGGKSTYIR
QVGVNVLMAQVGSFVPCDNATISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT
DRSLIIIDELGRGTSTYDGFGLAWAICEHIVEEIKAPTLFATHFHELTALANKNGNNGHK
QNAGIANFHVFAHIDPFNRKLTMLYKVQPGACDQSFGIHVAEFANFPPSVVALAREKASE
LEDFSPIAIIPNDIKEAASKRKREFDPHDVSRGTARARQFLQDFSQLPLDKMDPSEVRQQ
LSKMKTDLERDAVDSHWLQQFF
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgaatgaaaatttggaggaacagagcaagcttcctgagcttaaacttgatgctaagcaa
gctcaaggatttctctcatttttcaaaaccctacccaaggaccctagggcagttcgcctc
tttgatcgtcggcttgtagttccatctgaattaggcaggtggtgcagcaaactttctttc
tttcctggcacctatattaatnctgctcttgctccaaacttcggtcagaatggatgtgaa
gttggcttaggctatgttgatattacaaagagagtccttggtttaacagaatttctagat
gatagccacttcacaaatttggagtctgctttggttgctcttggttgcagagaatgtctt
gtaccagcggagactggcaaatccagtgaatacaggcctatgtttgatgcaatatctaga
tgcggcgtgatggtaactgaaagaaagaaaaccgaatttaaagggagagatttggtacag
gatcttggtaggctcgtcaagggttcagtagaacctgttcgagatttggtctctggtttt
gaatgtgcatcaggagctttgggctgcatactttcttatgcagaactacttgcggatgag
agcaattatggaaactatacagtcaaacaatacagcctcagtagttacatgagattagat
tctgctgctatgagagcactgaatgttatggagagcaaatcagatgctaataaaaatttt
agtttgttcggtctgatgaatagaacatgtactgctggaatgggtaaaaggttattgcac
atgtggctcaaacagcctttactagatgtagaagagattaactgtaggctggatttagtt
caatcattcgtggaggatgctgcgcttcgccaagacttgaggcagcatctaaaaagaatt
tcagatatcgagcggctgacacacaatcttgagaggaaaagagccagtttagtgcacgtt
gtaaaactctatcagtcaagcatcagagtaccatatatcaaaagtgttttggaacggcat
gatgggcaatttgcaacactcattagggaaagatatattgattctctggagaaatggagt
gatgataatcacctgaataagttcataggtcttgtggaaacttctgttgaccttgatcaa
cttgagaatggagaatacatgatttcttctgcatatgacccaaatttatctgctctgaag
gatgagcaagagacattggagcgacaaattcataatttgcacaaacaaactgccaatgat
cttgatctacctgttgataagtcgcttaaactagataaagaaacacaatttggacacgtc
ttcagaattaccaagaaagaagaaccaaaagttaggaagcagctaaattctcattacatt
gttctcgaaacacgtaaggatggggtaaagttcaccaatacaaaactcaaaaaactagga
gatcagttccacaagattgtagaggagtacaagagctgtcagaaagaattggtagctcgt
gtagttcaaacagctgcgagtttctccgaggtgtttgaaggtatagctggtgtactttct
gagttggatgtgctactgagttttgcggatttggctgccagttgcccaactccttacaca
agaccaaatatcagtccaccagatacaggagatattatacttgaagggtgtaggcatcct
tgtgtggaagctcaagattgggttaacttcattcctaatgactgtagactagttagggga
gagagttggtttcagattatcacaggccctaacatgggtggaaagtctacctacattcgg
caggttggtgtgaatgtcctgatggcccaagttggctcgtttgttccatgtgacaatgct
accatttctattcgtgattgtatttttgctcgtgttggcgctggagattgccagctgaga
ggagtttctacttttatgcaagagatgcttgagactgcgtcgatcttgaaaggagctact
gatagatcattgattataattgatgagttgggccgtggtacatcaacctatgatggcttt
ggtttagcttgggctatttgtgagcacattgttgaagaaattaaggcaccaacattgttt
gccactcactttcatgagctgactgcattggccaacaagaatggtaacaatggacataag
caaaatgctgggatagcaaattttcatgtttttgcacacattgacccttttaatcgcaag
ctaactatgctttacaaggttcaaccaggtgcttgtgatcagagttttggtattcatgtt
gctgaatttgcaaattttccaccgagtgttgtggccctggctagagaaaaggcatctgag
ttggaggatttctctcctattgccataattccaaatgacattaaagaggcagcttcaaaa
cggaagagagaatttgaccctcatgacgtgtctagaggtactgccagagctcggcaattc
ttacaggatttctctcagttgccactggataagatggatccaagcgaggtcaggcaacag
ttgagcaaaatgaaaaccgacctggagagggatgcagttgactctcactggcttcagcaa
ttcttttag

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