KEGG   Nicotiana tabacum (common tobacco): 107826437
Entry
107826437         CDS       T04643                                 
Name
(RefSeq) elongator complex protein 2-like
  KO
K11374  elongator complex protein 2
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nta03016]
    107826437
Transfer RNA biogenesis [BR:nta03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    107826437
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML EIF3I Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 107826437
NCBI-ProteinID: XP_016508904
UniProt: A0A1S4D6I8
LinkDB
Position
Un
AA seq 846 aa
MASESNSLQIREEVKRVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTAQILTTL
PGHKASVNCTLWLPNSKFAFKAKHMEQHYLLSGDAEGVIILWEYSLVDEKWRYVLQVPQA
HKKGVTCITAIMVSQQEAVFASASSDGTVNVWEVVFPSTCGGDCKLSCSDSLFVGSKPMV
ALSLAELPGNSKQLVLAMGGLDSKIHLYCGERNGKFLRACELKAHTDWIRSLDLSLPVYV
NGETSLLLVSSSQDKGIRIWKMTLQDSSANNKKQQTSLASYIKGPVLVAGSYSYQISMES
LLIGHEDWVYSVEWQPPSTSSVEGIDFFQPQSILSASMDKTMMIWQPEKTTGIWMNVVTV
GELSHCALGFYGGHWSPNADSILAHGYGGSFHLWKNVGVDFDDWKPQKVPSGHFAAVSDI
AWARCGEYMMSVSHDQTTRVFAPWLNNTSLENEESWHEIARPQVHGHDINCVTVIRGKGN
HRFVCGADEKVARVFESPLSFLKTLSHVTSDDSSFSADIQADVQILGANMSALGLSQKPI
YVQASSTTTDRSNTEGFDTLETVPEAVPVVLTEPPIEEQLSWHTLWPESHKLYGHGNELF
ALCCDHEGKLVASSCKAQSAPVAEIWLWQVGSWKSVGRLQSHSLTVTQLEFSHDNQYLLA
VSRDRHFSVFRINHTGTDEINYQLVAKQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWA
VENETSVKLLLTLPPFRSSVTALSWLGLDSHSNRGLLAVGMENGLIELWNLNRGTANGHS
STQNASLAVKFDPFLCHVSTVQRLSWRNPQKSEDSETVQLASCGADHCVRIFRVTVSSQQ
QQEEAQ
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggcttctgagagtaacagtctgcaaattagggaagaagtaaaaagagtgtttatagga
gcaggctgtaatagaatagtgaataatgtttcatggggtgcttctaatttagtttctttt
ggtgcccaaaatgccgttgccattttttgtcctaagacagctcaaattttgactacacta
cctggtcataaagcttctgtgaattgtaccctctggcttcccaatagcaagtttgcattt
aaagctaagcatatggaacaacattatttgctttccggcgatgctgaaggtgttataata
ttgtgggaatattctcttgtggatgagaagtggagatatgtcttacaagtgccacaagcc
cacaaaaaaggtgttacctgcatcacagcaatcatggtgtctcaacaagaagcagttttt
gcatctgcatcttctgatggcacagtgaacgtgtgggaagtagtatttccatctacttgt
ggaggtgattgcaaattgtcatgctcggattctctgtttgttggctcgaaacctatggtt
gctctttcactagcagagctcccagggaatagcaagcagctggttctggccatgggagga
ctggacagcaaaatccatctatattgtggtgagagaaatggaaaatttcttcgtgcttgc
gagttaaaggcccatacagactggattagaagtttagatctctcattgcccgtgtatgtg
aacggtgaaactagtcttcttcttgtaagttcatctcaagacaaaggcatacgcatatgg
aagatgactttacaggattcttcagctaataacaagaagcagcaaacaagcttggcttct
tacattaaaggtcctgtacttgtagctggctcgtactcttatcagatatctatggaatct
ctcctcattgggcatgaggattgggtatactcagtggaatggcagcccccatcgacttct
tctgtcgagggaattgatttttttcagcctcaaagcattttatctgcatccatggataag
acaatgatgatctggcaacctgaaaagacaactggtatttggatgaatgtagttaccgtc
ggggaattaagtcactgtgctttgggattttatggtgggcactggagtccaaatgcagac
tctattttagctcatggatacgggggatcttttcatctgtggaaaaatgttggtgttgat
tttgatgattggaagccacagaaagttccatctggacactttgctgcggtctcagacatt
gcctgggctagatgtggagaatacatgatgtctgtcagtcatgatcagacaactagagta
tttgctccttggctcaataatacaagtttagagaatgaagaatcttggcatgaaattgct
cgccctcaagttcatggtcatgacataaattgtgtcacagtaatcagaggaaaaggaaac
catcgttttgtctgtggggcagacgagaaagttgccagagtttttgaatctcctctttcc
tttctgaagacattgagtcacgttacgtcagacgactctagtttttctgccgacattcaa
gctgatgtgcagatattaggggcaaatatgtctgctctaggtctatcacagaaacctata
tatgttcaagcatcatcgacaacaacggacagaagcaatacggaaggttttgatacgtta
gaaactgttcctgaagcagttccagttgtcttgacagagccgcctattgaagagcaattg
tcatggcatactctatggcccgagtcacacaaactttacggtcacgggaatgagcttttt
gctctatgttgtgatcatgagggaaagcttgtagcttcatcctgcaaggctcaatcagca
ccggttgctgaaatatggctatggcaagtgggttcgtggaagtcggttggccgcttgcag
tctcacagtttaacagtgactcagttggagttctctcatgataaccagtatctgttggct
gtttcaagagatcgccacttctctgttttccgaattaatcacacaggaacggatgagata
aattaccagcttgtagctaagcaagaagcacataaaagaataatatgggcatgttcctgg
aacccgtttggtcatgaatttgctaccggttcaagggacaagactgtcaaaatatgggca
gtggaaaatgaaacgtcggtgaagctactattgacacttccacctttcaggagcagtgtc
actgccctgtcttggttaggcctcgacagccatagcaatcgcgggcttcttgcagtggga
atggaaaatggcttgattgaactatggaatctaaacagaggaacagcaaacggacattca
tcgacccaaaatgcttctcttgctgttaagtttgatccatttctatgccacgtctctact
gttcaacgtctatcttggagaaatccacagaagagcgaagattctgagactgtgcagctt
gcctcttgcggagctgatcattgtgtgagaatcttcagggtaactgtttcctcacaacaa
caacaagaagaagcccagtga

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