Nicotiana tabacum (common tobacco): 107826465
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Entry
107826465 CDS
T04643
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107826465
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107826465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
ERAP1_C
HrpJ
Motif
Other DBs
NCBI-GeneID:
107826465
NCBI-ProteinID:
XP_016508936
UniProt:
A0A1S4D6D5
LinkDB
All DBs
Position
Un
AA seq
2679 aa
AA seq
DB search
MATASDAYAVKSLNKSPGRRRFTFKTFSERIEDVEVDVYRSLDPLKAEPSEGSSFFRDCL
VEWRELNTAEDFISFYEEIFPLVQTLPQIILHKEQIVAKLLSRLDMKGRLSLEPILRLIA
ALSRDLLEDFLPFLQRIADSLACLLKSGADREPDIIEQIFKSWSFIMMYLQKYLVKDVVD
VLKVTVKLRYYSKEYVHEFMADSISFILRNAPVKQLIKGVRKLMFEVAKKPLEIRKSAVS
SLLWYVVRGSSSRLHSRAEQVLRLLIDKSLFVIGDQFSGGAETILEVLVLALQRLCAELE
ASELELMWACLYEEITECVSQGHLLHLGRLLSLLASTLQASYIRKISDYQGVLQLIQLIV
QTYILPYPIVKAIDQTSIIVEKALQSMLCILDGLYRANNISALSSVSMQWAPVFDLRNKS
LLSFIGDLLFKDPCIVQFFRASIISALNDMIEMSEEEVIHLLQIFVKRLPAQGHSFLDEV
PKEKLSRIHNFLQEAIVRWIQRIQKEPYSTQIGENELAILWGVIGCYPYVVGASANESLL
IDLVNALDELLSTESADIAGHPRTTWQSLVGAALGSYYKSLANQNSRSDDSIISRFLDLS
RKHKTCYQVLSPVADILDSVCGSIIQADASTKKYHPELVASKMVDALGAFAANLSHPDKN
MRLSTLRILCHYEPLTDVNSINEQPVEKKMRMDNPETTLVDYHGNNVMHLLLLIEETPLS
IATSRKVIRLISKIQMSLSAGQIAEEYIPAVLDGIIGIFHSRFSHLWNPTLDCIAVLLSQ
YFGLLWDRYIEYLDHYLSVFLGSHDEAAQSKEESLETAHNLTGSFRSYVCPVSETASRAT
IFSLLIQCLQKIPSVAESRSRQIIPLFLKFLGYNIENLESVELYNPEGCKGKEWKDVLQE
WLSLYRLMRNPRSFYLNQFFKEVLLYRLLEEDDADLQIKVIDCLLNWRDDFLIPYDQHLK
NLINSKSLREELTTWSLSRESDLVDTRHRVFLVPVVIRILAPKVRKLKALASRKHASVHH
RKAILGFLTQLDVEELPLFFALLIKPLISASQGAAAKSARLWTTPETLKHGFDSFGVLEH
FSRDCINAISWKKRYGFLHVIEDIVAVFDEVHISPFLDLLMGCIVRLLESSTSTLKGTRN
EGGLADHDHQVETNIVAKQSKDLRSLCLKIISFILSKYEDHDFSSEFWDLFFMSVKPLVA
SFKQEGASSEKPSSLFSCFLAMSRSSKLVPLLSREKNLVPDIFSMLAVSTASDAIISSVL
KFVENLLDLDIELGNEDNPLRRLLLPHVDVLVCSLHRLFVHDGAQKRKLVRYPGEKEFNV
FKLLSKQIKEPLAARKFLDILLPLLSKRSNDPEICVGTLQIIKHIVEPLGSESSKKIVKS
VSPLVISAGLDVRTSICDVLDAVAANDSSIHPAAKLLRELNATSIVELGDLDYDTIIAAY
EKISADFFHTVPEEHALIILSHAIHDMSSEDLILRQSAYRLLLSFVEFSSQVLVRKLKSE
QESSGAWVRHILSNFFLKHMGTAMNKEDSIQKVWIDLLRDMVLKLPMLEDFKSYAVLFSE
DPEQDFFNNIVHLQRHRRARALLRFRNVISSGNFSKVLINKVFMPLLFKMLLDGQVGKGE
NIRSACLEAVASITRCMEWRLYYALLNRCFREMTLKPDKQKVLLRLISSILDQFHFSDTP
SDHDTADSVQDIQTTCLIESGKVTGVSELAEIQMCLQKDMLPRVQKMLIADTDNVNVNIS
LILLKLLKLLPGDIMEVHLPSIIHRVANFLKNRLESVRDEARAALAACLKELGLEYLQFV
VKVLRGTLRRGFELHVLGFTLNFLLSKFLINPSSGRLDYCLEDLLSVAVNDILSDVSEEK
EVEKIASKMKETRKQKSYDTLKLIAQSITFKTHALKLLAPIIKHLQKQLTPKVKSKLENM
LSHIAAGIQRNPSVNQTELFIFGYGLIKDGVTDESPGHAETSISMESKQKKDGVNSQIAK
SDKLVSIDSRYSHLITEFALGVLQNYMKNMKLDKKDEQLLSMLDPFVRLLGECLNSKYEN
IMSASLRCLSPMVRLPLPSLESQAEKIKNSLLNIAQGSVASSNPLMESCVKLLTVLLRST
KITLSTDQLHMLIQFPLFVDLERNPSFVALSLLKAIVSRKLVVAEIYDIVKRVAELMVTS
QVESIRKKCSQILLQFLLDYHISEKRLQQHLDFLLSNLRYEHSAGREAILEMLHAIIMKF
PVSIIDEQSQMFFLHLVVCLANDRDNRVRSMTGTVIKLLIGRVSSHSLQSILEFSRSWYL
GDKPHLWSAAAQILGLLIEVVKDGFQKYIDSLLPVLRNILRSAVSVLTNKQVDLPNDATA
SSWKEAYYSLVLFEKILNQFPKLCFRKDLEDLWETICELLLHPHLWLRNISNRLVACYFA
SMTEACKENLELPQGTYFLMRPSRLFFIATSLCCQLKVLQTDDAASDLITQNLVFSICAL
HSFLGKNECKRQNKFWSTIEHDEQGLLLKAFQQLDSRKGKNIYLSLVSDLSDQEDENERY
LVISYLLKTMGKISLQVEDMQMKIIFSCFKSISPKLIDQSRLLSPEGEVDSQSYAYHMLL
PLYKVCEGFAGKVISDDVKQRAEEVRGSISNVIGVQSFVQIYSHIRKNLKSKRDKRKQEE
KVIAVVNPMRNAKRKLRIAEKHKAHKKRKMMSMKMGRWM
NT seq
8040 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcttcagatgcctacgctgttaaatctctcaacaaatcccctggtcgccgc
cgctttactttcaagacattttcggagcggattgaagatgttgaagttgatgtgtacaga
agtcttgaccctttaaaagctgagccgtctgaaggttcctccttcttccgggattgcctt
gtggaatggagagaattaaacactgccgaggattttatttcattttacgaggaaatattt
cccttggtacagacgctaccacaaattatactgcacaaagaacagatagtcgcaaaactt
ctttcaaggttggacatgaaagggagactatcccttgagccaatcctcaggttaattgca
gccctatctagagatctcctggaggacttcttaccctttctccagaggattgctgactct
ttagcgtgtcttctcaaaagtggtgctgatagagaaccagatataattgagcagattttc
aaatcgtggtcttttattatgatgtacctgcagaaatatcttgttaaagatgttgttgat
gttctgaaggtaacagtaaaattaagatactattccaaggagtacgtccacgaatttatg
gctgactcaatatcattcatattgaggaatgctcctgttaagcagcttataaaaggggtg
aggaagcttatgtttgaagttgcgaagaaaccattggaaataagaaaatccgctgtcagt
tcattgttgtggtatgttgttagaggaagctcctcaaggttacactcaagggctgaacaa
gtgttacgcctactgattgacaagtctctgtttgttataggtgatcagttctccgggggt
gctgagaccatccttgaagttcttgttctagcactgcagaggttatgtgcggagttagaa
gcttcagagttggagttgatgtgggcttgcttatatgaggagataactgagtgtgtatct
caaggccacctattgcaccttggtcgccttttgtcccttcttgcttctaccctgcaagct
agttacattcggaaaatttctgattaccaaggggtgcttcaattgatccagttgattgta
cagacttacattctgccttatcctattgtgaaggcaattgatcaaacatcaatcattgtt
gaaaaagctttacagtcaatgctttgcattcttgatggtctatatagagctaataatatt
tctgctctctcttctgtttcgatgcaatgggctcctgtgtttgatttaaggaataagagt
ttgttgtcttttatcggagatcttctatttaaggacccttgcattgtccagttcttcaga
gctagcattataagtgcattaaatgatatgatagagatgtcagaggaagaggttatacat
ttgctgcagatctttgttaagaggcttccagcacaaggacatagcttcttggatgaggtt
ccaaaagagaagctttcaagaattcacaattttctccaagaagccatcgttcgttggatt
cagcggatacagaaggaaccatattctacccaaattggagaaaatgagttagccatactg
tggggagtcattggctgttatccgtatgtagtaggtgcttcagcgaatgagtcattgcta
atagacttggttaatgctttagatgagcttttgagtactgaatctgctgacattgctggg
catcctagaactacctggcagagcttggttggtgctgcattgggttcttattataagtcg
ctggctaatcaaaattccagatctgatgattccatcataagcagattcttagatctgtca
aggaagcacaagacatgttatcaagtgttgtctccagtagctgatattttggattcagtt
tgtgggtccataatccaagctgatgcaagcactaaaaaatatcacccggagctggtagcg
agtaagatggtggatgccctaggcgcgtttgctgcaaatttgagccatcccgacaagaat
atgcgtctttcgaccttaagaatattgtgccactacgaacctttgactgatgtcaactct
attaatgaacaacccgttgagaagaaaatgagaatggataatcctgagactactcttgtg
gactaccatggcaataatgtgatgcatctcctacttttgattgaagaaacgcctctttct
attgccaccagtagaaaggtcattcgactgatttccaaaatacagatgagtctatctgct
ggacagatagctgaagagtatatacctgctgttcttgatggaattattggaatctttcat
agccgttttagccatttgtggaacccaacattggactgcatagctgtcctcctcagtcaa
tattttgggttgctgtgggacagatatattgagtaccttgatcattatctgtctgttttt
cttggttctcatgatgaagctgctcaaagcaaggaggaatcattagagacagctcataat
ttgactggaagcttcaggtcctatgtctgtccggtgtctgaaactgcgtcacgtgcaaca
attttttctttattgattcagtgtttgcagaaaattccatctgttgctgaatcgcgttca
cgacaaatcatacctctgttcttgaagttcctaggctataatattgaaaatcttgagagt
gtggaattatacaatccagagggttgtaaagggaaagagtggaaagacgttcttcaagaa
tggttgtccttatatagactgatgcgaaaccctaggtctttttatctcaatcaattcttc
aaggaggttttactatacagacttcttgaggaagatgatgctgacttgcaaattaaggtc
attgattgcctgttaaattggagagatgactttttaattccgtatgatcagcatctaaaa
aatctgatcaattcaaaaagtctgagggaggagctcacaacatggagcttatccagggaa
tcagatcttgttgatacaaggcatagagttttccttgtgcctgttgttatcagaatactg
gctccaaaagtcagaaagttaaaggcgctcgcttctcgtaagcatgcaagtgtccatcat
cgaaaggcgattcttggcttcttaacgcagctagatgttgaagagcttcctcttttcttt
gccttgctgataaaaccacttatatctgcttcacaaggtgctgcagcaaagagtgcacgg
ctctggacaacacctgaaactctaaagcatgggtttgactcatttggtgtcctggagcat
ttttccagagattgcatcaatgccatttcatggaagaagagatatggttttctgcatgta
atcgaggatattgtagctgtttttgatgaagtgcatattagcccttttcttgatctgtta
atgggatgtattgtacgcctcttggaaagcagcacatcaactcttaaaggcacaagaaat
gagggggggctagctgatcatgatcaccaagtggagacaaacatagttgcaaagcagtcc
aaggatttgagatctttatgcctgaagatcatctcttttattcttagcaaatacgaagat
catgatttcagttctgaattttgggatttgttctttatgtcagtaaaacctttagttgct
agtttcaaacaggaaggtgctagtagcgagaagccaagctcgttattttcttgttttctg
gctatgagtagaagttccaaacttgtgcctctgttgtccagagaaaagaatcttgtacct
gatatattctcgatgctagcagtctcaacagcatcggatgccatcatttcctctgttctt
aagttcgttgagaatctgttggatcttgatattgagctgggtaatgaagacaaccctctt
aggagattactgcttcctcatgttgatgtacttgtatgcagtttgcatcgtctttttgta
catgatggtgcgcaaaagaggaagcttgtcagatatcctggggaaaaagagttcaatgtt
ttcaagctgttatcaaagcagataaaggaaccgttggctgcaaggaagtttcttgatatc
ttgcttccgcttctgtcaaagagatccaatgaccctgagatttgtgtaggcactttacag
attattaagcatattgtagagccattgggtagtgagagcagtaaaaagatcgtcaaatca
gtttctccgctcgtaatttctgctggcttggatgttcgcacttctatttgtgacgttctt
gatgctgtcgcagcgaacgattcttctatacatcctgcggcaaaacttcttcgcgaattg
aatgccacgtctatcgtggagttgggagatcttgattatgatactataattgcagcttat
gaaaagataagtgcagactttttccacactgtcccggaagaacatgcgttgattattctg
tcacatgctatacatgatatgtcgtctgaggatcttattttgagacagagtgcatataga
ttattgctttcgtttgtcgagttttctagtcaagtgctcgttagaaagttgaaatctgaa
caagaatcttctggagcctgggttaggcacatcctaagcaacttctttttgaagcacatg
ggtactgccatgaacaaagaagattcaattcagaaggtatggatcgatctacttcgggat
atggtcctgaagcttccaatgctggaagacttcaaatcatatgcagttcttttcagtgaa
gatccagagcaggacttttttaacaatattgtgcatttgcaaagacacaggagagcaagg
gctttgttacgatttaggaatgtcatcagttctggaaatttctctaaggttctcataaat
aaagtatttatgccgcttcttttcaaaatgttgcttgatggacaagttggaaagggtgaa
aatattagaagtgcatgtttggaagctgttgcatcaattactagatgtatggagtggcga
ttgtattatgcgttactcaatagatgctttcgggagatgacactgaaaccagataaacaa
aaggtgttattgcggttaataagctccattttggaccagttccatttttcagacactcct
tctgatcatgacactgcagattctgtgcaagatattcaaactacttgtttgatagagtca
ggcaaagtcactggcgtttctgaacttgcggagatacaaatgtgcctccaaaaggatatg
cttcccagggtacaaaaaatgttgattgctgatactgataatgtcaatgtaaacatcagt
ctaattctgcttaagttgcttaagctactccctggagacattatggaagtgcatcttcca
tctataatccatcgtgtagcgaatttccttaagaatcgtttggaaagtgttcgtgatgaa
gccagagctgctttggctgcttgtttaaaagaactagggctggagtacttgcaatttgtt
gtcaaagtcttgagaggcactctgaggagaggattcgaattgcacgttttggggttcact
ctcaattttctactatcaaaatttcttataaatcccagtagtgggaggttggattattgt
ttagaggatcttctctcggttgcagtaaatgatatactcagtgatgtttcggaggagaaa
gaggttgagaagattgcttcaaagatgaaagagactaggaagcaaaagtcatacgatacc
cttaaattgattgcacaaagtatcacgttcaaaacacatgctctgaagctgcttgcgcca
attattaagcatctacagaagcagctgactccaaaagtaaaatcaaaattagagaacatg
ttgtctcatatagctgctggaatacagcgtaatccatctgtaaaccagacggaactcttt
atctttggatatggtctaattaaagatggagtaacagatgaatctcctgggcatgcagag
acatcgatttcaatggaaagtaagcaaaagaaagatggagtaaacagccagattgctaaa
tcagataagttggtcagcattgattcacgatattctcaccttattaccgaatttgctctt
ggagtgcttcagaattacatgaagaacatgaaattagacaagaaagatgagcagttgtta
tcaatgcttgatccatttgtaagattattgggtgaatgcttgaactcaaaatatgagaat
atcatgtctgcttcacttaggtgcttgtctcctatggtgaggcttcctttgccatcactt
gaatctcaggcggagaagataaagaattcgttactgaatattgctcaaggttcagtagcc
tccagtaatccattgatggagtcatgtgttaagttgctaacagtgcttttgcgtagcact
aagatcacactttctacggatcaactgcatatgctaatccagtttccgctttttgttgat
cttgaaagaaatccctcttttgttgctctctcactgttgaaagcaatagtgagtaggaag
ttggtagttgcggaaatctatgatatagttaaacgtgttgcagagttgatggtgactagt
caagttgaatcaattcgtaagaaatgcagccaaattttgctgcagtttttactggactac
cacatctccgagaaacgtctgcagcagcatcttgatttcttactttcgaatttaagatat
gagcattcggctgggagagaagccattcttgaaatgcttcatgctatcataatgaaattc
ccagttagcatcatagatgaacaatctcagatgttttttctgcatttggtggtttgtctg
gcgaatgatcgtgacaacagagtccgttcgatgactggtactgtcataaagttacttatt
ggacgagtcagttcccattcactccagtcaattcttgagtttagtcggtcctggtacctg
ggcgataaaccacatttgtggagtgctgcagcacagattttggggttactcattgaagtg
gtgaaggatggtttccaaaagtatattgatagtctcttgcctgttttgagaaacatcttg
cgatctgcagttagtgttcttacaaataagcaagtggatctacccaatgatgcaacggct
tcatcttggaaagaagcatattattcactggttctatttgagaagatattaaatcaattt
cctaagttgtgcttcagaaaggatcttgaggatctgtgggaaacaatctgcgagttgctt
ttgcatccgcatctgtggttgcgcaacatatcaaaccgtcttgtggcttgctactttgcc
tccatgaccgaggcttgtaaagaaaaccttgaactgcctcaaggaacttactttttgatg
aggccaagtagacttttctttatagctacttctctttgctgtcaactgaaggtgctgcag
actgatgatgctgctagtgatctcattactcaaaatcttgtcttttcaatttgcgctctg
cattcattcttaggaaaaaatgaatgtaagcgtcaaaacaagttctggtccaccattgaa
catgatgagcagggtcttctacttaaggcttttcaacagcttgattcaaggaaagggaaa
aacatctacttatctcttgtgtctgaccttagcgatcaagaagatgaaaacgagcggtac
ttggtcatttcctatttgcttaagacaatgggaaagatttcccttcaggtggaagatatg
cagatgaaaattatcttcagttgtttcaaatcaatttcaccaaagcttatagatcagagt
agattgttgtcccctgaaggtgaggttgattcccaaagctatgcatatcatatgctgttg
ccgctctacaaagtgtgtgaaggatttgctggaaaagttatttcagatgacgtgaaacaa
cgggctgaagaagtgcgcggaagcataagcaatgttataggagtgcagagtttcgtccaa
atctacagtcatataaggaagaatctcaaatccaagagggataagaggaaacaagaagag
aaggtcattgccgtggtgaatccaatgagaaatgccaagagaaagctgaggatcgccgaa
aagcataaagcacacaagaaaaggaaaatgatgtcaatgaagatgggaagatggatgtag
DBGET
integrated database retrieval system
