Nicotiana tabacum (common tobacco): 107826921
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Entry
107826921 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107826921
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107826921
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107826921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Utp25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
107826921
NCBI-ProteinID:
XP_016509451
UniProt:
A0A1S4D7X2
LinkDB
All DBs
Position
Un
AA seq
802 aa
AA seq
DB search
MASQSSNKKRPNKSKKRSRVDSEEFERINSLPWNSTISEEDDAFSFLIGSNDVEGGGFLS
LEEIDESEYNLEIAKPSGGSEKKGKTTLKKQKLDTKNEELNDEAKGESKEDIEEVEKDTK
QKKNKKKKQKKKKDKINKDAVNNAEGNEESSAVTDENDDREQDSVDETEYYAWNELRLHP
LLMKSIYALKFKEPTPIQKMCIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREK
AERQLTENGEMDEKVAPTGLLRALIITPTRELALQVTDHLKEAARHSNFRVVPIVGGMSS
EKQERLLRTRPEIVVGTPGRLWELMSGGEIHLVELHSLSFFVLDEADRMIENGHFHELQS
IVDMLPMASKSTDGDSQKTHNCETVSSVQRKKRQTFVFSATIALSADFRKKLKRGSQKSK
ANDELNSIETLSERAGMRADAAIIDLTNASILANKLEESFIDCSEEDKDGYLYYILSVHG
QGRTIVFCTSIAALRHISSLLRILGVNIWTLHAQMQQRARLKAIDRFRTNEHGILIATDV
AARGLDIPGVRTVIHYQLPHSAEVYVHRSGRTARAHSDGCSIALITPNDTSKFAALCKSF
SKENFQRFPLEMSYMPEVMKRLSLARQIDKISRKDSQDKAKNNWLQRNAESMGLVLEDND
SEEERVNNHKRKKATSAQLNKLQGELKILLSRPLQPKTFSKRYLAGAGVSPLLQHQLEEL
AKQKNPNNSGDVKTKKLMVIGQDCVEPLQALRSAGPQANFNLKGIAEKRKDVNELRRKRK
ETKKRLREQRRKQKKKLQAGKE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagtcttcaaataagaagagaccaaacaaatcaaagaaacgaagccgagtt
gactcagaagaattcgaacgaatcaactcactgccatggaactctacaatatccgaagag
gacgatgctttctcctttctcattggctctaacgacgtcgaaggaggaggttttctatct
cttgaagagatcgatgaatcagagtacaatttagaaattgccaaaccaagtggaggaagt
gagaaaaaggggaagacaacactgaagaaacagaaattagataccaagaatgaggaattg
aatgatgaagctaagggtgagagcaaagaagatattgaggaggtggaaaaggacacaaaa
cagaagaagaacaagaagaagaagcagaagaaaaagaaagataagatcaataaagatgct
gtaaataacgctgaaggaaatgaagagtcatcagctgtcactgatgaaaacgatgatcga
gaacaggattcagtagatgaaactgaatattatgcatggaatgaactgagacttcatccc
ctgctcatgaaatcaatatatgcactcaagttcaaagaacccacaccaatacagaaaatg
tgtattccagcagctgctcaccaaggaaaggatgttgtgggtgctgcggagacaggatca
gggaaaacactagcttttggcctgcccattcttcaacgtctgcttgaggaacgagaaaag
gccgaaaggcagcttacagaaaatggagagatggatgaaaaagtcgctccgacaggtctt
ctccgtgctctaattattactcctacaagagagctcgcccttcaggtcaccgatcatttg
aaggaagcagcaagacattccaattttagggttgtccctattgttggtggaatgtcaagt
gaaaagcaggaaagacttttgagaacaaggcctgaaattgttgttggaactccagggagg
ctctgggaacttatgtctggtggtgaaattcatcttgtggagttacactcactgtcgttt
tttgtgctggacgaggcggatcgcatgatagaaaatggccatttccatgagttgcagtct
atagttgacatgcttcctatggctagtaaatcaactgatggcgattcgcagaaaacacat
aattgtgaaacagtttccagtgtccaaagaaagaaaaggcaaacatttgtgttttctgct
accattgctttgtctgctgatttcaggaagaagttaaagcgcggatcacaaaaatcaaaa
gcaaacgatgagttgaattcaatagaaactctttctgagagagcaggaatgagggcagat
gctgcaataattgatctgaccaatgcatcaattctagcaaacaagctcgaggaatcgttt
atagactgtagcgaagaagataaagatggttatttatattacatcttgagtgttcacggg
caaggccggacaattgtcttttgtacgtccattgcagctttacgccatatctcctccctc
ttgcgcatccttggcgtcaatatttggacacttcatgcccagatgcagcagagagcccga
cttaaggcaattgaccggtttcggacaaacgagcatggtatactcattgctacagatgtt
gcagccagaggactggatattcctggtgttcgaacagtcattcactatcagctaccacat
tcagctgaagtttacgttcatagaagtggaagaaccgctagggctcattctgatgggtgt
agcattgctctaatcacaccaaatgatacgtcaaagtttgctgctttatgcaagtcattt
tcgaaggaaaactttcagcgatttcctttagaaatgtcatacatgccagaagttatgaag
cgattatcccttgcacgtcaaatagacaagatttcgcgaaaggactctcaggacaaggcc
aagaacaattggcttcagcgaaatgctgaatcaatgggactagttttggaagataatgat
agtgaggaggaaagggtgaacaaccataagcgaaagaaagccacgtctgctcaactaaac
aagctacaaggggagctcaaaattcttctttcacggccattgcaacctaaaacattttca
aaacgctacttggctggggctggtgtttcacctctccttcagcaccaactggaggaatta
gctaagcagaaaaatccaaataattctggagatgttaaaacgaagaagttgatggttatt
ggtcaagattgtgtcgagcctctccaagcacttagaagtgctggtccacaggctaacttc
aacttgaagggaattgctgaaaagcggaaagatgtaaacgagttaaggagaaagagaaaa
gaaaccaaaaaacgtttgcgtgaacaacggcgaaaacagaagaaaaagcttcaagcagga
aaagagtag
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