KEGG   Nicotiana tabacum (common tobacco): 107827062
Entry
107827062         CDS       T04643                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107827062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107827062
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107827062
 Complex B
    107827062
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 107827062
NCBI-ProteinID: XP_016509610
UniProt: A0A1S4D8B3
LinkDB
Position
Un
AA seq 596 aa
MGYNRQKDKNGYRSSSKGNGDDGTSARTRPLSFDDIMLRRKSKEEELDIKNNFVGAESVS
RKEDRHKRTTDGLEPERNRYDESLPSASRHTSEDSRKLASRQTENNMMAEKLARGKHKDS
RESEIKSKTSVNKDVSNKRLAGSKTDKDYLVRRRKDEEFVDDSGNETGKRHSRDLARKER
STDKTDRRRDEGRKDKDPDKDERQSYRKRKDMEVPSDAPLDEAEKRHSRNYGRRDSDKTE
IKSESGRRKHRSDDEERNRDKNADKKHSSSKVSEVTGRVESSRAQLEEERPKRRRSRSRE
YDKDRGRRSRSGSPRGLKHSSHDHRERGEFSSHSSKDKSGRSHYDLDKKISSNGSDSHSK
RHAESTSGLGGYSPRKRKSEAAAKTPPPTNRSPDRKNAGWDLPPASAGSNVTGSVPSSVQ
SSMQSVIPNIHQLSSVVPANTFTTKTAGVSYNYLFSSIHATDSVQLTQATRPMRRLYLEN
LPNSASEKDILDWINHSLLSSGVNRIQGTLPCISCMIHKDKRQALLEFLTPEDASAALSF
DGRSFCGSILKIRRPKDFVEVAVKNKVSIFIIKKSRSSSSQRVGRMKRFDLSSMLE
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgggatacaatcggcaaaaagataagaatggttaccgtagttcatcaaagggtaatggc
gatgatggtacatcagctaggacaagacctctcagttttgatgacatcatgcttagaagg
aaaagtaaggaagaggaactggacattaagaacaattttgtaggagctgagagtgtatcg
cgtaaagaggacaggcataagaggactactgatggtttagaacctgagcgaaaccgctac
gatgagtcattacctagtgcttccagacatacttcggaggattctaggaagttagcatca
aggcaaacagagaataatatgatggctgaaaaattagctaggggtaaacataaagatagt
agagaatctgaaatcaaatcaaagacatcagtgaacaaagatgtaagcaataagagacta
gctggtagcaaaaccgacaaagattatcttgtccggagaagaaaagatgaggaatttgtt
gatgattctggaaatgaaactggtaaaagacattcaagagatttggcccggaaggagaga
tcgacagataaaactgacagaagacgcgatgagggaagaaaagacaaagatcctgataag
gatgagagacagtcatacaggaagaggaaagatatggaagtgccaagtgatgctcctctg
gatgaggctgagaaaaggcattcaagaaattatggacggagagatagtgacaaaactgaa
ataaagtctgaatcaggtagaaggaagcaccgaagtgatgacgaggagagaaacagagac
aagaatgccgataaaaaacacagttcatcgaaagtttctgaagttaccggaagggtggaa
tcttctcgggctcagctggaggaagaaagaccaaagagaaggcggtcaagaagtcgagag
tatgataaagatcgaggtagaaggtctcgttctgggtcaccaagaggacttaagcattca
tctcatgatcacagagagcgtggtgagttttcctcgcattcttccaaagataaatctgga
agatcacattatgatctggataaaaagatatccagcaatggttcagatagccactccaag
cgccatgcagaatctacaagtgggcttgggggctattcaccaagaaagaggaaatcagag
gctgctgctaaaactcctcctccaactaaccgctctccagatcggaaaaatgctgggtgg
gatctaccacctgcatcagctggaagtaatgttactggttctgttccttctagcgttcag
tcttcaatgcaatctgtaataccaaatatacatcagctctctagcgtggttcctgctaat
acatttacaacaaagactgctggcgtttcatataattacttattttcatctatacatgca
actgattcggtccagctgacacaagcaacacggcctatgagaaggctttatctagaaaac
ttgccaaactccgcctctgagaaagatattctggactggattaatcattctttgctgtct
tcaggagtcaatcgcattcaaggaacactaccatgtatcagctgtatgatacacaaggat
aagcgccaagctcttctagaatttttaacccccgaggatgcttctgctgcactttctttt
gatggcagatccttctgtggttctattcttaaaatcaggcggccaaaagacttcgtcgaa
gtggctgtaaaaaacaaggtgtccatctttatcataaaaaagtcaaggtcttcatctagt
caaagagtaggacgcatgaagaggtttgacttgtcctcaatgcttgaatga

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