KEGG   Nicotiana tabacum (common tobacco): 107827195
Entry
107827195         CDS       T04643                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04120  Ubiquitin mediated proteolysis
nta04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107827195
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    107827195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107827195
Enzymes [BR:nta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107827195
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107827195
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107827195
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd zf-C3HC4_2 Beta-prop_WDR19_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_EML zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_RFWD3 zf-C3HC4_3 WD40_like Beta-prop_WDR75_1st zf-RING_2 Beta-prop_WDR35_TULP_N zf-C3HC4_4 Beta-prop_DCAF12 Beta-prop_IFT140_1st zf-RING_UBOX zf-RING_5 U-box Beta-prop_IFT122_2nd DUF1664 zf-RING_10
Other DBs
NCBI-GeneID: 107827195
NCBI-ProteinID: XP_016509772
UniProt: A0A1S4D8M8
LinkDB
Position
Un
AA seq 681 aa
MGGGGGERSIGALVPTVKSEPENAGETSVPAAVTTDVQEQIPMPEKEEEVDKDMLCPICM
QIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLTTNRLYPNFLLNKLLMKRSARQM
AKSATPVEQLRQAIQQGCDVSIKELESLLSLLMEKKRKMEQEEAETNLQILLEFLQCLRK
QKVEELNEIQNDLKYIKEDINAVQKHRMELYRARSRYSAKMRMLVDDSSAMAVRPSLGDK
EGGEIVSSSVGSQEQVRVGTTQTRNTDAGAPGISQLVQWKDDRGGSDSQDPNQPVRAIAR
KKRVHAQFNELQTCYLQKRRYWARHSEKQEERVANVMNREGYSAGLEDFQSVLSTFTRYS
HLRVVAELRHSDLFHSANIISSIEFDRDDELFATAGVSRRIKVFEFASVVNEPADAQCPV
VEMSTRSKLSCLSWNKCTKNQLASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFCYT
EPSLLVSGSDDCKVKVWCTKQEASVLTIDMKANICSVKYNPGSSVHVAVGSADHHIHYYD
LRNVSQPLHIFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVRENVPLRTFKGHANEKN
FVGLTVNREYLACGSETNEVFVYHKAISKPAAWHKFGSDDQNDPDGDMGSYFISAVCWKR
DSPTILTANSQGTIKVLVLAA
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgggagggggaggaggagagcgttcaatcggagctttagtcccgacggtgaaatcggag
ccggagaatgccggtgaaacttcagtaccggcggcagtgacgacggacgttcaggagcaa
attccaatgccggagaaggaagaggaagtggataaggacatgttatgtccgatatgtatg
caaattataaaggatgcttttctcacggcgtgtggacatagcttttgttacatgtgcatt
gttactcatcttcacaacaaaagtgattgtccttgttgctctcattacttgactactaat
cgcctttaccctaatttcctactcaataagttattgatgaagagatctgctcgccaaatg
gccaaaagtgcaacacctgtggaacaacttcgccaagcaattcagcagggatgcgatgtg
tccatcaaagagctggagagtctattatcactacttatggaaaagaaaagaaaaatggaa
caagaagaagctgaaacaaatcttcagattctgcttgagtttctccagtgtttaaggaag
caaaaagttgaagagcttaatgagatccaaaatgatctcaagtacattaaagaagacata
aatgctgtgcagaagcatagaatggagttatatagggcaaggagtagatattcagcgaaa
atgagaatgctagtagatgattcttcggcaatggcagtcaggccttcattgggagataag
gaaggtggtgaaattgtttctagttctgtcggttcacaagaacaagttcgtgtgggtact
acacagaccaggaacactgatgcaggtgctcctgggatttctcaacttgttcaatggaag
gatgaccgcggtggatcagattcacaggatcctaatcaacctgtacgggcaatagcaagg
aaaaaacgtgttcacgcacagttcaatgagcttcaaacctgttacctgcaaaagaggcgc
tattgggcaagacactcagagaaacaggaggaaagggtagcaaatgtcatgaatagagaa
ggttattctgcgggacttgaagattttcaatctgttctgtctacctttacgcgatacagt
catttgagggttgttgctgaacttagacattctgaccttttccactcggccaatataatt
tcaagtattgaatttgaccgagatgatgaattgtttgctactgctggggtgtcacgaaga
attaaggtctttgagtttgcatcggtggtaaacgaaccagcagatgcgcaatgtcctgtt
gttgaaatgtctacacgatccaaattaagttgtttgagctggaacaagtgcactaaaaac
cagttagcaagcagtgactatgagggcatagtgacggtttgggatgttacaactcgtcag
agtgtgatggagtatgaggagcatgaaaaacgagcatggagtgttgacttttgctatact
gaaccttctctgcttgtgtctggtagtgatgattgcaaggtcaaagtttggtgcacgaag
caggaagcaagcgttcttacgattgacatgaaagctaacatttgctcagtgaagtataat
cctggatccagtgttcatgtagctgtaggttctgccgatcatcacattcactattatgac
ttgagaaatgttagccagccactgcatattttcagtgggcaccgtaaagctgtttcttac
gtaaagtttttatccaacaatgagctagcttctgcatcaacagatagtacattgcgtttg
tgggatgtcagagagaatgttccactgcgtacttttaaaggacatgcaaatgagaagaac
tttgtggggcttacagtaaacagagaataccttgcatgtggcagcgagacaaatgaagtg
tttgtttatcacaaggcaatttctaagccagcagcttggcacaaatttggttctgatgat
cagaatgatccagatggggacatgggatcatatttcatcagtgctgtttgttggaaacgt
gacagcccaacaattctaacggcaaatagtcaagggacaataaaagtgcttgtccttgct
gcttga

DBGET integrated database retrieval system