Nicotiana tabacum (common tobacco): 107827611
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Entry
107827611 CDS
T04643
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107827611
09122 Translation
03013 Nucleocytoplasmic transport
107827611
03015 mRNA surveillance pathway
107827611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107827611
03041 Spliceosome [BR:
nta03041
]
107827611
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107827611
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
Cap binding complex
107827611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
107827611
NCBI-ProteinID:
XP_016510270
UniProt:
A0A1S4D9Z6
LinkDB
All DBs
Position
Un
AA seq
862 aa
AA seq
DB search
MSSWKSLLLRLGEKCPEYAGNADFKDQIEACYSAVRRELEHSGDDIFPFLLQCAEQLPHK
IPLYGTLVGLLNLENEEFVAKLVENAQINLQDALETGKCNRIRILMRFLTVLMCSKVIQP
SALVVIFECLLSSAATTVDEEKGIPSWQARADFYITCILSCLPWGGAELVEQVPEEIERV
MVGVEAYLSIRKRVSDAGFSVFEDIEETNNAVNEKDFLEDLWSRVQDLSSRGWKLDSVPR
PHLSFEAQLVAGKSHDLAPVSCPEQPGPSGVLSGIAFGRQKHEAELKYPQRIRRLNIFPS
NKTEDIQLIDRFVVEEYLLDVLLFLNGCRKECTSYMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFKPTYYTLVIIDLCKALPGAFPAVVAGAVRALFDKIADLDMDCRTRLILWFSHHLS
NFQFIWPWEEWAHVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENTPALEELLPPR
GGPQFKYSAEDGTDPTERALSVELKDMVKGRKSAREMISWVEENVFPAHGFDITLRVVVQ
TLLDIGSKSFTHLITVLERYGQVIAKICTDDDQQVKLISEVSSYWQNSAQMTAISIDRMM
SYRLISNLAIVRWVFSSSNLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLERSVVL
AEEAASRARDQLDSAESKLSIMDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKE
ALLARAVDEIKVLILSLYKGFLTALAEPLNDAFRDGTLRPSGQADDMKIDLEDSSVMDLD
KDDGGRPKKSHPNGSRERNGYNLDGKQQWCLSTLGYLKAFTRQYASEIWQNIENLDAEVL
TEDAHPLFRKAIYCGLRRPLDE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaagagcttgcttttgcgactcggcgagaagtgccctgagtacgccgga
aatgccgacttcaaagaccaaattgaggcatgctatagtgcagttcgccgagaattggag
cattctggagatgatatttttcccttccttctccagtgtgctgagcaattgcctcacaag
attcctctgtatggaacgctggtaggccttttgaatttggaaaatgaggaatttgttgcg
aaattagtggagaatgctcaaattaatttacaggatgccttggagactggaaagtgcaat
aggatccgtatattgatgaggtttctgactgttttgatgtgcagcaaagttatccaaccg
agtgcattagtggttattttcgaatgtttattatcatcagcagcgactactgtggacgag
gaaaaaggaattccctcttggcaagcacgtgctgacttttatataacttgtattttatca
tgccttccttggggtggagctgaacttgttgagcaagttcctgaggagattgaaagggtt
atggttggagtagaagcctatttaagtattcgaaaacgtgtttctgatgctgggttttct
gtctttgaggatattgaagaaaccaataatgctgtcaatgagaaggatttcttggaggat
ttgtggtctcgagttcaagatctttccagtagagggtggaaacttgatagtgttcccaga
ccgcacctctcttttgaggcacaattggttgctggaaagtctcatgatttggctccagta
agctgccccgagcaaccaggtccttctggagttttatctggaattgcctttggtagacaa
aagcacgaagctgagttaaaatatcctcagaggataaggaggcttaatatatttccatca
aataaaactgaggatattcaactcattgatcgctttgttgtggaagagtatttgttggat
gtgcttttattcttgaatggatgtcgaaaggaatgcacttcatacatggttgggctgcct
gtaccattcagatatgaatatcttatggctgagacaatattctctcagcttcttctgtta
cctcaaccgccattcaaaccgacatattacacattggttatcatcgatttatgcaaggct
ctgccaggggcctttccagcggttgtagctggggctgtccgtgctctttttgataaaata
gcagatttagacatggattgccgaacacgtctcatcctttggttctcacatcatttgtca
aactttcaatttatctggccatgggaagaatgggctcatgtgttagatctgccaaaatgg
gccccacagcgtgtgtttgttcaagaggttttggaaagagaagtccgtctttcatattgg
gacaaaatcaagcagagcattgagaacacccctgctttggaggagttacttccaccgaga
ggtggaccacagtttaaatatagtgcagaagatggtaccgatccaactgagcgtgcgctc
tctgtagagcttaaggacatggtgaaaggtaggaaatctgccagggaaatgatttcctgg
gtagaagaaaatgtttttccagcccatggttttgatatcaccctcagagttgttgttcaa
acacttcttgacattggatccaaaagctttactcatttgattactgtcttggagagatat
ggccaagtcatcgcaaagatttgtactgatgatgatcaacaagttaagctgattagtgaa
gtaagttcttactggcaaaacagcgcacaaatgacagctatatccattgaccggatgatg
agttatcggcttatatctaatttggccatagtgagatgggttttctcttcatcgaacctt
gatcgatttcatgtctctgacagtccatgggagatcctcaggaatgctgtcagtaagacg
tataatcggatttctgatctgaggaaagagatttcatcccttgagagaagtgttgtcttg
gcagaagaagctgcatctagagccagagatcagttagattctgcggagtctaagctgagt
atcatggatggggaacctgttcttggtgaaaaccctgtaagaataaaacggctgaaatca
tatgcggaaaaagcaaaagaggaagaggtgtctgttcgtgaatctttagaagcaaaggaa
gctcttcttgctcgagcagttgatgaaattaaggttttgatcctttcattgtataaaggc
ttcttgactgctttagcggaaccccttaatgatgcattcagagatggaaccttgcggccc
tctggtcaggcagatgacatgaagattgaccttgaagattcttctgtaatggacttggac
aaggatgatggtggaagaccgaagaaaagtcatcctaatggaagcagagaaagaaatggc
tataatcttgatggaaaacagcaatggtgtttatcaactctgggttacctcaaggcattc
accaggcaatatgcttcggagatatggcaaaatattgagaatttggatgctgaggtacta
actgaagatgctcatcctctatttcgaaaagctatatactgtggcctgcgaagacctttg
gatgaatga
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