Nicotiana tabacum (common tobacco): 107827829
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Entry
107827829 CDS
T04643
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107827829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107827829
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107827829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Whib
Motif
Other DBs
NCBI-GeneID:
107827829
NCBI-ProteinID:
XP_016510525
UniProt:
A0A1S4DAV3
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All DBs
Position
Un
AA seq
174 aa
AA seq
DB search
MMYSDTGRLNCNISYTTFATPDHGQGSDNKELSSMLHKALEGAIILESFPKTTVDVFALV
LESGGSDLPVVISCASLALADAGILLHDLVASVSVSCLGKNLVIDPISEEESYQDGSLMI
TCMPSRNEVTQLSITGEWSTPKTNEAMELCLGACSKLCEVMRSCLKDAVTDSKE
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatagtgatacaggacgcttaaattgtaacattagttacacaacttttgccacc
cctgatcatggacagggatcagacaacaaggagctttcctcaatgctacataaagcttta
gagggtgctataattctggaatccttcccaaagactactgtggatgtttttgctttggta
ttggaatctggtggaagtgatctccctgtggtcatatcatgtgctagtctagctttagca
gatgcgggaattttgctgcatgacttggttgcctcagtttctgtgtcttgtcttggaaag
aacctcgtcattgatcccatttctgaggaagaaagctaccaagatggaagcttaatgatt
acttgtatgccttcacgtaatgaggtcactcaactgtctataactggagaatggtcaaca
ccaaagactaatgaggcaatggagctatgccttggtgcttgttccaaactgtgtgaggtt
atgcgatcatgtttgaaagatgctgttactgattcaaaagaatag
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integrated database retrieval system
