Nicotiana tabacum (common tobacco): 107828303
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Entry
107828303 CDS
T04643
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107828303
03083 Polycomb repressive complex
107828303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107828303
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107828303
Histone modification proteins
HAT complexes
HATB complex
107828303
HDAC complexes
Sin3A-HDAC complex
107828303
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107828303
PRC2.2
107828303
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107828303
Heterochromatin formation proteins
Other heterochromatin formation proteins
107828303
Chromatin remodeling factors
NuRD complex
107828303
NuRF complex
107828303
NuRF complex (fruit fly)
107828303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
DUF6922
Motif
Other DBs
NCBI-GeneID:
107828303
NCBI-ProteinID:
XP_016511067
UniProt:
A0A1S4DCA1
LinkDB
All DBs
Position
Un
AA seq
403 aa
AA seq
DB search
MTEAEMEAAGGTEEEVEEEFSVWKKNTPLLYDLVICHALEWPSLTVQWLPSPAVDNGSFL
THKLILGTHTSDDFPNFLMVANVHLPRNPASGIEHNLSNPQIPKVEIVQKIHVDGEVNRG
RCMPQKPAVVAAKTSSAEVYVFDSGKQPLDHEGGSCDPDVRLRGHDKEGYGLSWSPFKEG
YLLSGSDDRKICLWDVSAMPQHKVLLAHHTYEEHADVVDDVSWHPKNENLFGSVGDDCRL
IIWDLRTNKSQHSVVVHEKAVNYLSFNSYNEWVLATASSDSTVGLFDMRKLSTPLHVFGS
HTDEVFQVEWDPNHETVLASSAGDRRLMVWDLNRIGDEQLEGEAEDGPSELLFSHGGHKA
KISDFSWNKNEPWVISSVAEDNTIQVWQMAESIYRDDDDNGDC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcagaaatggaggcggcgggaggaacggaagaagaagtggaagaggaattc
tccgtttggaagaagaacacgccgttactttacgaccttgtcatctgtcatgcccttgaa
tggccttctctcaccgttcaatggcttccgtcacctgccgtcgacaacggttccttttta
acacacaagctcattctagggacccacacttccgatgatttccccaattttctcatggtc
gctaacgtccatcttccccgtaaccctgcttcaggaatcgaacacaatctcagtaaccct
caaatccctaaggtagagatagtacaaaagatacatgttgatggagaagtgaataggggg
agatgtatgccacaaaagccagctgtagttgcggcaaagaccagtagcgctgaagtttat
gtctttgacagtggtaaacagccactcgatcatgaagggggatcttgcgaccctgatgtt
cgacttagagggcatgataaagaaggttatggcttatcgtggagcccatttaaagagggt
tatcttttgagtggttcggatgatcgaaagatatgtttgtgggatgtttctgcaatgcct
caacataaagtgcttctggcccatcatacatatgaggaacatgcagatgtagttgatgat
gtatcgtggcatccaaagaacgagaacctatttggttctgttggagatgattgtcgtctg
atcatttgggacttaaggacaaacaaatcacaacactctgttgtagtgcacgagaaagcg
gtgaattatttatccttcaactcgtataatgagtgggttcttgctacagcatcatcagat
agtactgtcggtctgtttgacatgcgaaaactgagcactccattgcacgtgtttggtagt
cacacggatgaggtatttcaggtagaatgggatcctaatcatgagaccgtactggcatct
tcagctggtgatagaagattgatggtctgggatcttaacaggattggtgacgagcaattg
gaaggggaagctgaagatgggccctctgaacttctcttctctcatggtggtcacaaagca
aagatttctgacttctcatggaacaagaacgagccatgggtcatttcaagtgttgcagaa
gacaatactatccaagtgtggcagatggctgagagcatttatcgtgatgacgatgacaat
ggcgactgctaa
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integrated database retrieval system
