Nicotiana tabacum (common tobacco): 107828335
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Entry
107828335 CDS
T04643
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00531
Glycosaminoglycan degradation
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107828335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nta00536
]
107828335
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107828335
Glycosaminoglycan binding proteins [BR:
nta00536
]
Heparan sulfate / Heparin
Enzymes
107828335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107828335
NCBI-ProteinID:
XP_016511107
UniProt:
A0A1S4DCE0
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All DBs
Position
Un
AA seq
538 aa
AA seq
DB search
MGSLFLQKGMLVWICLFSLRLVCGYSEVAQGSVFIDGKNAIGRTDNNFICATLDWWPPEK
CDYGTCAWDHASFLNLDLNNIIFLNAIKAFSPLKIRLGGTLQDKVIYETEDHKQPCVSFV
KNTSEMFGFTPGCLPLSRWDELNAFFNKSGASIIFGLNALYGRSVHPDGLSVGAWDSSNA
ESLIRYTVKKGYAIHGWELGNELCGSGVGTRVAADQYASDTTALYKIVLDAYKNFEPRPL
VIAPGGFFDEGWFRELINKTGKSFDVATHHIYNLGPGRDEHLVDKILDPSYLDGEADTFS
KLQNVLKTSGTSVVAWVGEAGGAYNSGRDHVTNAFVFSFWYLDQLGMSAAYDTKAYCRQT
LIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSTTFSGSKKIRAYAHCAKQSRGITL
LLINLDGNTTMSANVAFNGTMLHQRKHRHHSHRKSSSIRLPKSRKIASNTRQEYHLTAKD
GDLQSQTMLLNGKPLTIDSFGNIPSLEPIFVNSTEPLTVAPFSIVFVHIPYVILPACS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttatttttgcaaaagggaatgttggtgtggatttgtttgtttagtttgaga
ttagtttgtgggtactcagaggttgctcaaggtagtgtgtttatagatgggaagaatgcc
attggaagaacagacaataatttcatttgtgctactttggattggtggccacctgagaaa
tgtgattatggaacttgtgcttgggaccatgcttctttccttaatctggatcttaacaac
attatttttctcaatgcaataaaagccttctcgccattaaagattcggttaggaggcact
ttacaagacaaagtcatatacgaaactgaagatcataaacagccctgtgtttcatttgtt
aaaaacacatcagagatgtttggttttactccagggtgccttcccttatctagatgggat
gaactcaatgcattctttaataaatccggggctagcataatttttggattgaatgctctc
tatggaagatctgtacaccctgacggtttatctgtcggagcttgggattcaagcaatgct
gaatcgcttatacgttatactgtcaaaaaaggatacgctatccacggttgggagcttggg
aatgaattgtgtggaagtggagttggaaccagagttgcagcagatcaatatgcatctgat
actactgccttgtacaaaatagtactagatgcttacaagaattttgaacctaggcctctg
gtcattgcgccaggaggtttcttcgacgaaggctggtttagggaattaataaataaaact
gggaaatcatttgatgtggctactcaccacatatataaccttggtccaggaagagatgaa
cacctagttgataaaatcctcgatccatcttatctcgatggtgaggccgacacatttagc
aaacttcagaatgtactcaagacgtctggtacttcagtggttgcttgggttggtgaggct
ggaggggcttacaacagcggtcgcgaccatgtcacaaatgcctttgtttttagcttctgg
tatttggaccagcttgggatgtcagctgcttatgatactaaagcatactgtcgacagaca
ctgattggtggaaactatggtttactcaacaccactacctttgtacccaatccagattac
tacagtgctcttctttggcaccgattaatgggaaggaacgttttgtcaacaactttctca
ggatcaaagaaaatacgtgcctacgcacattgtgcaaagcaatctcgaggtatcacctta
ttgttgatcaatcttgacggcaacactaccatgagtgccaacgttgcttttaacggtact
atgttgcatcaaagaaagcacagacatcatagccacagaaagagttcttcaattagactg
cctaaaagtagaaagatagcatcaaatacaagacaagaataccatttaacagcaaaagat
ggagatttacagagccagactatgctgctgaatgggaaaccactaactatagattcattt
ggaaatataccatcattggagcctatatttgtcaattcaacagagccattaacagtggct
ccattctctattgtatttgtacacataccatatgttattttgcctgcttgtagctga
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