Nicotiana tabacum (common tobacco): 107828671
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Entry
107828671 CDS
T04643
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107828671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107828671
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
SR proteins
107828671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
107828671
NCBI-ProteinID:
XP_016511520
UniProt:
A0A1S4DDJ9
LinkDB
All DBs
Position
Un
AA seq
322 aa
AA seq
DB search
MSRSSRTIYVGNLPGDIREREVEDLFYKYGPIAHIDLKVPPRPPGYAFVEFEEARDADDA
IRGRDGYDFDGHRLRVELAHGGRGNSSANDRYSGNSSGRNHKFGAPKRTEYRVLVTGLPH
SASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYNDMKYAIKKLDESEFRNAFSRS
TIRVKEHNSRSRSRSRSYSGRKSGSRSRSPSRSRSRSSKSPKAKSSKRTRSRSRSVSSQP
HSGLKGRSVSRSPSRSRSPVPSRPKHASKSPTPHNSRKSRSVSKSPKPRNSRRSQSMSKS
PKPRSSRRSQSRSRSRSGSLSR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcaagtaggacaatttatgttggtaatcttcctggtgatattcgtgagcga
gaagtggaggatctgttctacaagtatggcccgatagctcatattgatctgaaagttcca
ccaagaccccccggttatgcttttgttgagtttgaagaggctcgcgatgctgatgatgct
attcgtgggcgtgatggctatgattttgatgggcatcgcttgagggttgaacttgcacat
ggtgggcgtggtaactcatctgcaaatgatcgttatagtggcaatagtagtggtcgtaat
cacaaatttggagcgcccaaacgtaccgagtatcgagtattagttaccggattgccccat
tcagcatcctggcaggatcttaaggatcacatgcgtcgagctggggatgtttgtttctca
caagttttccgtgagggtggtgggaccactgggattgtggattatactaactacaatgac
atgaaatatgctatcaaaaaacttgatgaatctgagttccggaatgctttttctcgttcg
acgattcgagtgaaggaacataattctagaagccgcagccgcagccgttcttactcggga
agaaagagcggtagtcgtagccgcagtccaagtcgtagccggagcagaagcagcaaatct
cctaaagctaaatcttcaaagcgtacaagatctcgttctcgatcagtgtcgtctcagccc
cattctggtttaaaaggacgctctgtgtcaagatctccatcaagatccagatctccagta
ccatctcgtccaaaacatgcgagtaaaagcccaaccccccacaattccaggaaaagccgg
agtgtgagtaaaagcccaaaaccacgcaattccaggagaagccagagcatgagtaaaagc
ccaaaaccacgcagttccaggagaagccagagccgcagccgcagccgcagtgggagtttg
tcaaggtaa
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