KEGG   Nicotiana tabacum (common tobacco): 107828785
Entry
107828785         CDS       T04643                                 
Name
(RefSeq) protein VACUOLELESS1-like
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:nta00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    107828785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107828785
Membrane trafficking [BR:nta04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    107828785
   Hops complex
    107828785
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st
Other DBs
NCBI-GeneID: 107828785
NCBI-ProteinID: XP_016511640
UniProt: A0A1S4DDW8
LinkDB
Position
Un
AA seq 845 aa
MAAVTVAAEWQLLHNRYYRKPELYQMQWKHVDLTRNKVACAPFGGPIAVIRDDAKIVQLY
AESALRKLRIFNSAGVQISETVWKNPGGRLIGMSWTDDQTLVCITQDGTIYRYNIHAEPI
EPNSQLTLGADCFTHSVVECIFWGNGVVCINEAFQVYCIPDFNNPKPIKLADTGLEDFPL
CTAVIEPQYTMSGNVEVLMGVADHVLLVEEDGVQQVGLGIGPLQKMVVSQNGKLLAAFTH
DDRLLVISTDFSSTIFDYTFEKSALPPEQLAWCGLDSVLLYWDDKLLMVGPGDPVSYFYD
EPVLLIPECDGVRILSNMSMEFLHRVPDSTVSIFQIGSTLPAALLYDALDHFDRRSAKAD
ENLRLIRSSLPEAVEACIDAAGHEFDVSQQRTLLRAANYGQAFCSHFQRDHIQEMCKTLR
VLNAVRYPDIGIPLSIQQYKLLTPAVLIARLINAHRHLLALQISEYLGMNQEVVVMHWTX
TCTKITASAAIPDATLLEMLLDKLKICKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSK
QVPLLLSIGQEDTALMKATESGDTDLVYLVLFHIWQKRPALEFFGTIQARPLARDLFVNY
ARHYKHEFLKDFFLSTGQLQDVAFLLWKESWELSKNPMASKGSPLHGPRIKLIEKSQHLF
AETKEYVFESKAAEEHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAAKVK
TEFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACVDADEKGEALKYI
PKLTDPRERAEAYARIGMAKEAADAASQAKDNELLGRLKQTFAQNAAASSIFDTLRDRLS
FPSVS
NT seq 2538 nt   +upstreamnt  +downstreamnt
atggcggcagtcacagtggccgcagaatggcagctcctccacaatcgctactaccggaaa
ccagaactttaccagatgcaatggaagcacgtggacctcacgcgcaacaaagtcgcctgc
gctcctttcggcggtccaatcgctgtcatccgtgacgacgctaagatcgtccaactctac
gccgaatccgcccttcggaagctccgtatcttcaattctgccggcgttcagatctccgaa
actgtctggaagaatcccggcggccgactcattggcatgtcatggactgacgatcaaacc
ctagtttgcatcactcaggacggcaccatttaccgttacaatatccacgccgagcctatt
gaaccgaattctcagctcacattaggcgctgactgttttactcatagcgtagttgaatgc
atcttctggggaaacggtgtcgtttgtattaacgaggcgtttcaggtttactgcataccc
gatttcaacaacccgaaaccaatcaaattggcggatactggtttggaggattttccgtta
tgtacggctgtgatcgagccgcagtatactatgtctgggaatgtggaggtactgatgggt
gttgctgatcacgtgttgctagtggaagaggatggtgttcagcaagttgggcttggaatt
gggcctctacagaaaatggtggtttctcagaatgggaagcttttggcagcttttacacat
gatgacaggcttcttgttatctctacagacttctccagcactattttcgactatactttt
gagaagtcagccctaccccctgagcagctagcatggtgtggattggacagtgtactactc
tactgggatgataagcttctaatggtgggtcctggagatcctgtcagctatttttatgat
gaaccagttctccttatccctgaatgtgacggggttagaatactctccaacatgagcatg
gaatttcttcatcgtgttccagattcaactgtctccatatttcagattggtagcacacta
ccagctgctttgctttatgatgccttagatcattttgacaggcggagtgccaaggctgat
gagaatctgaggctgatacggtcttcgttgcccgaggctgttgaagcatgtattgatgca
gcaggtcatgagtttgatgtttcacagcaacggacgcttttaagagcagcaaactacgga
caagccttttgcagccattttcaacgggaccacattcaagagatgtgcaaaaccttacga
gtcctaaatgctgtacgttacccagatattggaattcctctcagtattcagcagtataag
ttgcttacgcctgctgttctgattgctcgtcttattaatgctcatcgccaccttcttgcg
ctacaaatatcagaatatcttggcatgaatcaggaagttgtagtcatgcattggacaang
acatgtacaaagatcacagcatcggcggcaatccctgatgccactcttctagaaatgtta
cttgataagctgaaaatatgcaaggggatctcttatgctgcagttgctgctcatgcggat
aagaatggtcgtcgaaagttagctgccatgcttgttgaacatgagccacgttcatctaag
caggttcctctattgctaagcattggacaagaagatactgctctgatgaaggctactgaa
agtggtgatactgatctggtttatcttgtccttttccatatctggcagaagagaccagct
ttggagttcttcgggacaatacaggccagacctctagctcgtgatttgtttgttaattat
gcacggcattacaagcacgaatttctgaaggactttttcctatctactggacaacttcag
gatgtagctttcctattatggaaagaatcatgggaattgtctaaaaatccaatggctagc
aaaggatctccacttcatggtccaagaataaaactcattgagaagtcccagcaccttttt
gcagaaacaaaggagtatgtttttgaatcaaaagctgctgaagagcatgcaaaattgtta
aggatgcaacatgagttggaggtgactacaaaacaggccatctttgtggattcaagtata
agtgatacaattcgtacatgcattgtgctggggaaccatcgtgctgccgcaaaagtcaaa
acagaatttaaggtttcggaaaagcgatggtattggctcaaagtttttgctctggcaact
attagggattgggatgccttggagaagttttcaaaggagaaaaggccaccaattggttac
cgcccatttgtcgaggcatgtgttgatgcagatgagaaaggtgaagcgctaaagtacata
ccaaagctgactgatcctcgcgaaagagcagaggcttatgcccgaattggaatggccaag
gaagctgccgatgctgcttctcaggctaaagataatgaattacttgggaggttgaagcag
acttttgctcaaaatgcagcagcttcatcaatttttgacacactgcgagaccggttatcc
ttcccaagtgtttcttga

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