Nicotiana tabacum (common tobacco): 107828785
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Entry
107828785 CDS
T04643
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107828785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107828785
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107828785
Hops complex
107828785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
107828785
NCBI-ProteinID:
XP_016511640
UniProt:
A0A1S4DDW8
LinkDB
All DBs
Position
Un
AA seq
845 aa
AA seq
DB search
MAAVTVAAEWQLLHNRYYRKPELYQMQWKHVDLTRNKVACAPFGGPIAVIRDDAKIVQLY
AESALRKLRIFNSAGVQISETVWKNPGGRLIGMSWTDDQTLVCITQDGTIYRYNIHAEPI
EPNSQLTLGADCFTHSVVECIFWGNGVVCINEAFQVYCIPDFNNPKPIKLADTGLEDFPL
CTAVIEPQYTMSGNVEVLMGVADHVLLVEEDGVQQVGLGIGPLQKMVVSQNGKLLAAFTH
DDRLLVISTDFSSTIFDYTFEKSALPPEQLAWCGLDSVLLYWDDKLLMVGPGDPVSYFYD
EPVLLIPECDGVRILSNMSMEFLHRVPDSTVSIFQIGSTLPAALLYDALDHFDRRSAKAD
ENLRLIRSSLPEAVEACIDAAGHEFDVSQQRTLLRAANYGQAFCSHFQRDHIQEMCKTLR
VLNAVRYPDIGIPLSIQQYKLLTPAVLIARLINAHRHLLALQISEYLGMNQEVVVMHWTX
TCTKITASAAIPDATLLEMLLDKLKICKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSK
QVPLLLSIGQEDTALMKATESGDTDLVYLVLFHIWQKRPALEFFGTIQARPLARDLFVNY
ARHYKHEFLKDFFLSTGQLQDVAFLLWKESWELSKNPMASKGSPLHGPRIKLIEKSQHLF
AETKEYVFESKAAEEHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAAKVK
TEFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACVDADEKGEALKYI
PKLTDPRERAEAYARIGMAKEAADAASQAKDNELLGRLKQTFAQNAAASSIFDTLRDRLS
FPSVS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtcacagtggccgcagaatggcagctcctccacaatcgctactaccggaaa
ccagaactttaccagatgcaatggaagcacgtggacctcacgcgcaacaaagtcgcctgc
gctcctttcggcggtccaatcgctgtcatccgtgacgacgctaagatcgtccaactctac
gccgaatccgcccttcggaagctccgtatcttcaattctgccggcgttcagatctccgaa
actgtctggaagaatcccggcggccgactcattggcatgtcatggactgacgatcaaacc
ctagtttgcatcactcaggacggcaccatttaccgttacaatatccacgccgagcctatt
gaaccgaattctcagctcacattaggcgctgactgttttactcatagcgtagttgaatgc
atcttctggggaaacggtgtcgtttgtattaacgaggcgtttcaggtttactgcataccc
gatttcaacaacccgaaaccaatcaaattggcggatactggtttggaggattttccgtta
tgtacggctgtgatcgagccgcagtatactatgtctgggaatgtggaggtactgatgggt
gttgctgatcacgtgttgctagtggaagaggatggtgttcagcaagttgggcttggaatt
gggcctctacagaaaatggtggtttctcagaatgggaagcttttggcagcttttacacat
gatgacaggcttcttgttatctctacagacttctccagcactattttcgactatactttt
gagaagtcagccctaccccctgagcagctagcatggtgtggattggacagtgtactactc
tactgggatgataagcttctaatggtgggtcctggagatcctgtcagctatttttatgat
gaaccagttctccttatccctgaatgtgacggggttagaatactctccaacatgagcatg
gaatttcttcatcgtgttccagattcaactgtctccatatttcagattggtagcacacta
ccagctgctttgctttatgatgccttagatcattttgacaggcggagtgccaaggctgat
gagaatctgaggctgatacggtcttcgttgcccgaggctgttgaagcatgtattgatgca
gcaggtcatgagtttgatgtttcacagcaacggacgcttttaagagcagcaaactacgga
caagccttttgcagccattttcaacgggaccacattcaagagatgtgcaaaaccttacga
gtcctaaatgctgtacgttacccagatattggaattcctctcagtattcagcagtataag
ttgcttacgcctgctgttctgattgctcgtcttattaatgctcatcgccaccttcttgcg
ctacaaatatcagaatatcttggcatgaatcaggaagttgtagtcatgcattggacaang
acatgtacaaagatcacagcatcggcggcaatccctgatgccactcttctagaaatgtta
cttgataagctgaaaatatgcaaggggatctcttatgctgcagttgctgctcatgcggat
aagaatggtcgtcgaaagttagctgccatgcttgttgaacatgagccacgttcatctaag
caggttcctctattgctaagcattggacaagaagatactgctctgatgaaggctactgaa
agtggtgatactgatctggtttatcttgtccttttccatatctggcagaagagaccagct
ttggagttcttcgggacaatacaggccagacctctagctcgtgatttgtttgttaattat
gcacggcattacaagcacgaatttctgaaggactttttcctatctactggacaacttcag
gatgtagctttcctattatggaaagaatcatgggaattgtctaaaaatccaatggctagc
aaaggatctccacttcatggtccaagaataaaactcattgagaagtcccagcaccttttt
gcagaaacaaaggagtatgtttttgaatcaaaagctgctgaagagcatgcaaaattgtta
aggatgcaacatgagttggaggtgactacaaaacaggccatctttgtggattcaagtata
agtgatacaattcgtacatgcattgtgctggggaaccatcgtgctgccgcaaaagtcaaa
acagaatttaaggtttcggaaaagcgatggtattggctcaaagtttttgctctggcaact
attagggattgggatgccttggagaagttttcaaaggagaaaaggccaccaattggttac
cgcccatttgtcgaggcatgtgttgatgcagatgagaaaggtgaagcgctaaagtacata
ccaaagctgactgatcctcgcgaaagagcagaggcttatgcccgaattggaatggccaag
gaagctgccgatgctgcttctcaggctaaagataatgaattacttgggaggttgaagcag
acttttgctcaaaatgcagcagcttcatcaatttttgacacactgcgagaccggttatcc
ttcccaagtgtttcttga
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