Nicotiana tabacum (common tobacco): 107828862
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Entry
107828862 CDS
T04643
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107828862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107828862
03036 Chromosome and associated proteins [BR:
nta03036
]
107828862
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107828862
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107828862
PBAF complex
107828862
GBAF(ncBAF) complex
107828862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
107828862
NCBI-ProteinID:
XP_016511734
UniProt:
A0A1S4DES7
LinkDB
All DBs
Position
Un
AA seq
945 aa
AA seq
DB search
MEEKRKDAGTPPPAVADTPTKAADVPSAEAPTSRRRGGGQKRKASAIGSGGAGSTPPSTS
SKRQAREKQSSVPFPPIHNGPLTRAARQQPNNAPAPAAAASPSSSGIKSESEVLPTAVAG
GEEALKVERELNEAKEDLEALEAEIEAEIEAIRSRDPNAHVVPTHAGWFSWRKVHPLEKR
TMPSFFSGKSESRTSEIYMEIRNWIMKKYHADPNVQIELSDLSELSSGDLDAKQEVMEFL
DYWGLINYHPFPQTNSDMRVDIDADESAKTDSLVDKLFRFESDETWTPVLPRSSVATPMS
SGFFPESAIAEELMKSEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFGSG
MSPSDFILMEPAEAGGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF
IEMPIEDIFLDTDVESNKSVKEKEDTVLSKDDTSASIDAPETKESKDDGNDNQLSSTVET
SKPENVNELIPREEVGENCALNALRDAFTAVGSYPPPGERVSFAEAGNPVMALAAFLVKL
VEANRVTASVRSSLKSISGNPSGEQLALRHCFVLEDPPEGKTSPDSDRPANGSVDPEDKK
DEDENVEMQKEEKLTSVIDENGLSIAPNKETKAEVNIDKECEEQDGENHEEKNEKELGEA
TQLVSTSDENPEKSDTSKQSSQIPTDKDEEPASRKGPDDAGLAVGKAPSTTSESDDLTSK
LELPPGFEKESVDRALTAMPSDSPDTPKDEDMMPAVQTKEPEQSAKSNTVAENDAGAGEA
KDSVDGRKDPLKTKNDLDIDKINRAAVTALSAAAVKAKCLADQEEDQIRQLTTSLIEKQL
HKLESKLTFFSDMDNVVMRVRELLERSKQRLIHERNQIIQSRYASSSRPVPQSLLANRPG
MTASRPLNAMSSQRLPNSRPIMAGIPTPSSFMPTTVTGNSMQPSK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacggaaggacgccggaactccaccaccggcagttgccgacacgccgacg
aaagcggctgatgttccgtctgccgaggcacctacgtctcgtcgaagaggcggcggccag
aaacgaaaagcaagcgccattggaagcggcggcgctggttcgactcctccatcaacttcg
tcgaagcgtcaggcgcgtgagaagcagtcatcagtaccttttccaccgatccacaacggt
ccgctcacgagagctgcacggcagcagccaaacaacgcccccgcccccgccgcagctgct
tctccgtcaagttctggtatcaagagtgaatcggaggtgctgccgacggctgtggccggc
ggagaagaggcgttgaaggttgagcgagagttaaatgaagctaaggaggatttagaggca
ttagaggctgaaattgaagctgaaattgaggcaattagatcccgagatcctaatgctcac
gttgtgccgactcatgctggttggttttcttggagaaaggttcatcctttggagaagcga
acaatgccgtcattcttcagtgggaagtcagaaagtaggacttcagaaatatacatggag
atacggaattggatcatgaaaaagtatcacgctgaccccaacgttcaaattgagttgagt
gatttgtctgagctctcatcaggagatttggatgcaaagcaggaagtgatggagtttttg
gattactggggtttaattaattatcaccccttcccacaaactaattcagatatgagagtt
gatattgatgcagacgagtcagcaaagacagattctttggttgataagttgtttcgattt
gaatcagatgaaacatggaccccagttcttccgaggtctagtgtagctactcctatgtct
tctggtttttttccagagtcagctattgctgaagaactgatgaagtctgaagggccagct
gttgagtaccattgtaactcttgttcagcggactgctcaagaaagcggtatcattgtcaa
aagcaggcagattttgacttgtgtagcgaatgcttcaacaacgggaagtttggatctggg
atgtccccttcagatttcattcttatggagcctgctgaggctggcggcgcaagtggtggg
aagtggacagatcaggagactcttcttctccttgaggcgctagagctttataaggaaaac
tggaatgaaattgctgagcatgtggctacgaagaccaaagctcagtgtattctgcacttt
attgaaatgccaatagaggatatattcctggatactgatgttgaaagtaacaagagtgtt
aaagaaaaagaagacacagttttgtctaaagatgatacatcagccagtattgatgcccca
gaaacaaaagagagtaaggacgatggaaatgacaatcagctttcatccacagtggaaact
tcaaagccagagaatgtgaatgagctaattccccgggaggaagttggtgagaactgtgca
ctcaacgcgctgagggatgcatttacagctgttggttcttatcctccacctggagaacgt
gtttcatttgctgaagctggcaatcctgtaatggcactggcagcgttcctggtgaaactg
gtagaagctaacagggttactgcctcagtacgcagctctttgaaatccatttctggcaat
ccatctggtgagcagctagccttaaggcactgttttgttttggaagatccaccagagggg
aagacatcacctgattcagatagacctgctaatggatcagttgatccagaagataagaaa
gatgaggatgagaatgttgaaatgcagaaagaagaaaaattgacatcagttatcgatgag
aatggcttgtcaattgcaccaaacaaagagaccaaagctgaagtgaacattgacaaagag
tgtgaagagcaggatggtgaaaaccatgaagagaaaaatgaaaaggaacttggagaagcg
acgcaattggtctctacgagtgacgaaaatccagagaaatctgatacttcaaagcaatcc
agtcaaattcctactgacaaagacgaggaacctgcatcacgtaaaggaccagatgatgca
gggttggcagtgggaaaggcaccaagtaccacatcagaatcagatgatctaacgtctaaa
ttagagctcccacccggctttgaaaaggagtcggttgatagagctttaacagccatgcct
tctgactctccagatactcctaaagatgaggacatgatgcctgctgtgcaaacaaaggag
cctgagcaatccgcgaaatcgaacactgtagctgaaaatgatgcaggggctggagaagcg
aaagactctgtagatgggagaaaagatcctttgaagaccaaaaatgatctggatatcgat
aagatcaatcgtgcagcagtcactgctctgtcggctgcagcagtcaaggcaaaatgtctt
gcagatcaagaagaggaccaaattcggcagcttactacgtcattaatagagaagcagtta
cacaagctggagagcaagttaaccttcttcagtgacatggataatgtggttatgagggtc
agagaactgctggagaggtcaaaacagaggcttatccatgagcgtaatcaaataattcaa
tcaagatatgcctcttcatctcgtcctgtgccacaatcactacttgctaacaggcctgga
atgactgcatctaggccgctaaatgcaatgagctcccaaaggctaccgaattcaagaccc
ataatggcaggaattcctacaccaagctcttttatgcctacaacagttacaggaaattca
atgcagccctcaaagtag
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