KEGG T04643: 107829053

Nicotiana tabacum (common tobacco): 107829053

Entry

107829053         CDS       T04643

Name

(RefSeq) uncharacterized protein LOC107829053

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

nta Nicotiana tabacum (common tobacco)

Pathway

nta03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:nta00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107829053
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107829053
   03041 Spliceosome [BR:nta03041]
    107829053
Messenger RNA biogenesis [BR:nta03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107829053
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107829053
Spliceosome [BR:nta03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    107829053

SSDB

Motif

Pfam:

RRM_1 RRM_7 RRM_occluded RRM_3 RRM_RdRP1_2

Other DBs

NCBI-GeneID:

107829053

NCBI-ProteinID:

XP_016511960

UniProt:

A0A1S4DES4

LinkDB

Position

5:complement(114188534..114191572)

AA seq 273 aa
MAFFTKAGNILRQAVSKQRINHEISASKPSIFQLIRCMSSSKLFVGGISWNTNDDALKQA
FSKYGDVVEARVIVDRETGRSRGFGFVTFNSSEDASAAIQALDQQELDGRRIRVNIANDR
TRGYGGGGGGGFGAGGYGGGGNYGAGGYGGGGNYGSGGGGDANVAGSYGANNYGSGESSF
GFGTSGGNNFPSGDSYASENQNLGAAAAGSGDTYGTGEAASNSFTSSFGSNDQFGNVDTS
NQAETGDVNSPVDAGEDFRDDNVESGDYANRRA

NT seq 822 nt +upstreamnt +downstreamnt
atggctttctttaccaaagctgggaacattcttcggcaggctgttagcaagcagcgcatc
aatcatgaaatatctgcatccaagccttcaatttttcaacttattagatgcatgtcttct
tcaaaactttttgtgggaggaatctcatggaacacgaatgatgacgctctcaaacaagct
ttcagcaagtacggagacgttgttgaagcaagagtaattgtggatcgcgaaactggaaga
tctaggggatttggcttcgttactttcaatagttctgaggatgccagcgctgctatccag
gctttggaccaacaggagcttgatggtcgtaggattagggtaaatatagcaaacgacagg
acaagaggatacggaggaggtggtggtggaggatttggagctggtggttatggtggtggt
ggtaattatggagctggtggttatggtggtggtggaaattatggcagcggaggtggtggt
gatgctaatgttgccggtagttatggagccaataattatggaagcggagaaagcagcttt
ggctttgggacaagtggcgggaacaactttccaagtggtgacagctatgccagtgaaaac
cagaacttaggtgctgctgctgcaggcagtggtgacacttatggtactggcgaggctgcg
agcaacagtttcacaagcagctttggcagcaatgatcaatttggcaatgttgataccagt
aaccaagctgaaactggtgatgttaatagcccagttgatgcaggtgaagatttcagagat
gacaatgttgagtccggtgattatgccaacagaagagcctga

DBGET integrated database retrieval system