KEGG   Nicotiana tabacum (common tobacco): 107829271
Entry
107829271         CDS       T04643                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107829271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107829271
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107829271
 Complex B
    107829271
 Complex C
   U2 SnRNP specific factors
    107829271
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_SRRT RRM_ACIN1 DUF4523 xRRM RRM_PARP14_3 DUF6445 RRM_YTH1 TP_0593_N
Other DBs
NCBI-GeneID: 107829271
NCBI-ProteinID: XP_016512230
UniProt: A0A1S4DFI2
LinkDB
Position
22:complement(10515954..10520751)
AA seq 232 aa
MMLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQAWVVF
SEVTAASNAVRQMQNFPFYDKPMRLQYAKTKSDCIAKAEGTYDKKKKQEEKVEKRKRTEE
TPQTGAANGPRADSNGGPAAASRQGRPSAQETVAEPNNILFIQNLPHETTSMMLEVLFKQ
YPGFREVRMIEAKPGIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK
NT seq 699 nt   +upstreamnt  +downstreamnt
atgatgcttacaggagacataccaccgaatcaaactatttacattaagaacttaaatgag
aaagtcaagaaagaagagctaaagaggtctctttattgcttgttctctcagtatgggagg
attgtggatatagtggcgctgaagactcccaaacttagaggacaagcatgggttgtgttc
agtgaggtaactgctgccagtaatgctgtgaggcaaatgcaaaacttcccgttttacgac
aaacctatgcggttacaatatgctaaaacaaagtcagattgtattgctaaggcagagggg
acctatgacaagaaaaagaaacaagaggaaaaagtggaaaaaaggaaacgtactgaagag
actccgcaaactggtgcagctaatggcccaagagctgacagtaatggaggcccagctgct
gcttctcgccaaggaaggccaagtgcacaagaaacagttgcagaaccaaataatattctc
tttatacagaatctgccccacgagacaacaagtatgatgcttgaagtgctcttcaaacag
tatccaggttttagggaagttcgaatgattgaagcgaagccaggtattgcattcgtggaa
tttgacgatgatgtccagtcttcggtcgccatgcaggcccttcaaggcttcaaaattacc
ccccaaaatcccatggctatcacctatgccaagaaatga

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