Nicotiana tabacum (common tobacco): 107829846
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Entry
107829846 CDS
T04643
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107829846
Transcription machinery [BR:
nta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107829846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
107829846
NCBI-ProteinID:
XP_016512797
UniProt:
A0A1S4DH40
LinkDB
All DBs
Position
Un
AA seq
519 aa
AA seq
DB search
MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS
KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK
DHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS
SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI
LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY
FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV
PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM
TTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTL
GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctctgcttctcggagtccattgggattgagcacaagt
ttttctgctcatttatgtccgcttaaaaggcctgtagttgtatcatttaaaaaagataaa
acgaaaaaaacaactttagttgcacctaaggaatccatatcgttgcctatagaaacatct
aaagagaatgaaaagaggtcaagacgagtatctaaacgtactgagagagtgcatgctgtt
tcaattgatattgaagcatctccaagtacgttagagttggactatagtgaagctgctgcc
aaacttgaaagtatctacaagcgcagtctggaaacagatagttccgatacagaagctaag
gatcatcaaatcgtgaagagaaggcaaaggacgaggaagagaattatagaaggcaatgag
gaagcgaagaagggaattgctgataatgtggtcaagaatcgtcgaaagaaatcaaagcgg
ctgaatcttgaccagaggattgctctgctaaagaataaagaaggtgaattggttgcttca
tcccaaaaaagagaacttaaagaggacaccgaagatgaaaaaattgataagcttgtcaga
gaatattcaggtgctactgacttagcgagcttagactggaagaaaatgaagatccctcca
gtgcttccatcttctgagcatgcgtggctcttcaagttgatgcaacctatgaaggctatc
cttcaagtgaaggagaacttgcaaaatgatttggggcgagaaccaactgacgctgaagta
gctgaggcaacaaatatcgatgcctccgaactacggaaaaatttggaagttggtcgagct
gccagaaataagctgattaagcacaatctacgtcttgttttgttcgtgataaacaaatat
tttcaagattttgctaatgggccaaaattccaagacctctgtcaggcaggcgtcaaggga
ctaattacagctattgatcgatttgaacctaataggaaattcagactgtcaacatatggt
cttttttggataaggcatgccataatacgttctatgacaacctcaagcttcaccaaagtc
ccattcgggcttgaatctatcagagtagaaattcagaaggccaaattgcagctgctattt
gagcttcagaggatgccaacagatgaagagataattgaaagagttagactttcccctgag
agataccatgaagtgatgaaagtatcaaaacctgtcttctctctccatgcaagacacatg
acgacccaagaagagtttattaatggaataactgatgtagatggcgtagatggggttaag
aggaagcaaccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagccc
aaggagagtctagtaatcagacaaagatatggacttgatggcaaaggtaatagaacattg
ggagaaattgcgggtaacctaaatatttcgagagagatggtacggaagcatgaagtgaag
gctctcatgaagctcaagcatccaactcgagtagattatcttcgccggtacatattctaa
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