Nicotiana tabacum (common tobacco): 107830231 Help Entry 107830231         CDS       T04643                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107830231  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nta03019]     107830231 Enzymes [BR:nta01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      107830231 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      107830231 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_24 AAA_22 ATP_bind_1 FtsK_SpoIIIE ABC_tran DUF1611 MMR_HSR1 Motif Other DBs NCBI-GeneID:  107830231 NCBI-ProteinID:  XP_016513214 UniProt:  A0A1S4DIJ1 LinkDB All DBs Position Un AA seq 473 aa AA seqDB search MAYGGTNVNPLAATGGSTTVRQVKLDKECELRIETSLDLPLRLRLLTGTAEIFGTEIPPE IWLTIPPRLKFAVFTWYGATIEMDGPTETDYTADETPMISYINVHAVLDGRRNRAKASPS DSDTSQGPRVVVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCVAATP IELPIDPVEGIPLEMPMVYFFGHVTPSANIDHYKVLVKELAQTLEKQFSGNAESRASGMV INTMGWIEGVGYELLLHAIDTFSATVILVLGQEKLCSMLKDVLKKRPNVDVVKLQKSGGV VSRNAKEKLCSMLKDVLKNRPNVDVVKLQKSGGVVSRNAKVRQKARGYRIREYFYGPSND LSPHSNVVNFGDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVSVSINRDLLHLVLAVSY ANEPDQIISSNVAGFIYVTDVDMHRKKITYLAPCAGELPSKYLIVGTLTWIEN NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt atggcttatggaggcacaaatgtcaatccattggcagcaacaggtggttcaacaactgtg aggcaggtgaagctggataaagaatgtgagctccgaattgaaaccagcctcgacttgccc ctccgtcttcggctcttgactggaacagctgagatttttggaactgaaatccctcctgaa atctggcttaccatccctccaagactcaaatttgctgtttttacttggtatggagccaca atcgagatggatggtcccactgaaactgattatacagcagatgagacaccgatgataagt tatataaatgttcatgctgtacttgatggacgaagaaatcgtgccaaagcttcgcctagt gattctgacacttctcagggcccaagggtcgtcgtcgtgggacctacagattctggcaag agtactttatcaaggatgcttcttagttgggcagcaaaacagggatggaaacctactttt gtggatttggacataggtcaaggatcgataactattccaggatgtgttgctgctacacca atcgagttgcctattgatcctgttgaaggaattccacttgaaatgcctatggtctacttc tttggtcatgtgactcctagtgccaacatagatcactacaaggtactcgtcaaggagcta gctcagactctggagaagcaattttctggcaatgctgaatctcgagcttcaggcatggta ataaatacaatgggatggatagagggagttggttatgagttgctactccatgcgattgat acattcagtgccacagttattcttgtcttgggtcaggaaaaactttgtagcatgctaaaa gatgtattgaagaagcggcctaatgtggatgtagtgaaacttcaaaagtccggtggtgtt gtatcaaggaatgcaaaagaaaaactttgtagcatgctaaaagatgtattgaagaatcgg cctaatgtggatgtagtgaaacttcaaaagtccggtggagttgtatcaaggaatgcaaaa gtacggcagaaagcaaggggctacagaatacgggagtacttttatggcccttcaaatgac ctctcaccacattctaatgtagtgaacttcggtgacttgttcatctaccgaattgggggt ggaccacaggctccacgctcagctttacctattggtgcagagcctgctgcagatcctaca agattggtttctgttagtatcaaccgggacttgctccatttggttcttgccgtctcgtat gccaatgaaccagatcaaataatttccagtaatgttgccggattcatctatgtcacagac gttgacatgcataggaaaaagataacatatcttgcaccatgtgctggggaacttccgagc aaatacctaatcgtgggaaccttaacatggattgaaaactga

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