Nicotiana tabacum (common tobacco): 107830289
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Entry
107830289 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107830289
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107830289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
Motif
Other DBs
NCBI-GeneID:
107830289
NCBI-ProteinID:
XP_016513294
UniProt:
A0A1S4DJ33
A0AC58UQ29
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All DBs
Position
6:complement(141309836..141316367)
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AA seq
443 aa
AA seq
DB search
MASGSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
ELAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPSYL
IPELGPCTLKITYSAHTDLSVKFQSHRSRDYTNPHLPVAPSAIDASGQFSLGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHTVFSAFGPVLKIAMFDKNGGVQALIQYPDVRTAVVAKG
ALEGHSIYEGGYCKLHITYSRHTDLSIKVNNDRSRDYTIPNTPMLNSQPSIFGQQPPQIG
GPGVHPYSAPAHYAPAPGVAPPQHSAGWNSAAATANPGMPMQMHNHPYMPPGSVPSQMGS
AVIPMHGRNGIPYSTAMPPYHQQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggtctagccaaccccagtttcgatacacacagccaccatcaaaggtcctc
catttgagaaacttaccatgggagtgcacagaggaggagctgatcgaattggggaagcca
tttggtaaagttgttaataccaagtgtaatgttggagcgaaccggaatcaggcatttata
gagttagcagaattaaatcaagctattgcaatgatatcgtactacgcctcttcctcagaa
ccggctcaggtacgagggaaaaccgtctacctacaatattccaacaggcaagagatagtg
aacaacaaaactacagcagatgtagctggaaatgtgttgttggttacaattgaggggaat
gatgctcgccttgtcagtattgatgttttacatttggtgttttcagcttttggatttgtg
cacaaaatcacaacatttgagaagacagctggattccaggctctggtgcaattttctgat
gcagaaaccgctacttcagcaaaggatgccctggatggaagaagcattcccagttacttg
attccagaacttggaccatgtacacttaaaatcacatattctgctcatacggatctgagc
gtgaagtttcagagtcatcgtagcagggattacaccaatcctcaccttcctgttgctccc
tcagccatagatgcaagtggtcagttcagtttgggtttggatgggaagaaactggaacct
gagagtaatgttcttcttgcttccattgagaacatgcagtatgcagttaccttggatgtc
ctacacacggttttctcagctttcggtcctgtactaaagattgctatgtttgataagaat
ggaggggttcaggctctgatacagtaccctgatgtacgcacagctgttgttgcgaaggga
gctttagaaggacattccatttatgaaggtggatattgcaagcttcatatcacttactct
cgacacactgatcttagtataaaggttaataatgatcgcagcagagattatacaatccca
aatacccctatgttgaattctcaaccttcaatctttgggcagcagccacctcagatagga
ggtccaggtgttcatccatacagtgcccctgcccattacgctccagctccaggtgttgct
ccgcctcagcattctgcaggctggaactctgctgccgccacagcaaatccaggaatgcca
atgcagatgcataatcacccttacatgccacctggtagtgtgccttcacagatgggttct
gcggtgattccaatgcatggacggaatggcataccgtattctactgcaatgcctccttat
catcaacagtag
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