Nicotiana tabacum (common tobacco): 107830439
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Entry
107830439 CDS
T04643
Name
(RefSeq) crossover junction endonuclease MUS81-like
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107830439
03460 Fanconi anemia pathway
107830439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107830439
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107830439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
UBA
Motif
Other DBs
NCBI-GeneID:
107830439
NCBI-ProteinID:
XP_016513470
UniProt:
A0A1S4DJ93
LinkDB
All DBs
Position
19:complement(70910430..70920956)
AA seq
657 aa
AA seq
DB search
MEYQKKVVCPENEELAAYMWNKKQEMAENPKGISDNILKTLHKAYTNLCNSKTPIKTLKE
FSEIKGVGKWILRQMKGFFEADDPGASSSEESDNSGEKGKRNKGTKRYMPQKNSVAYALL
ITLYRCTTNGEKFMHKQELIDATEASGLSRAPVGPEKGKGKAGQFGSPRDWYSGWSCMGK
LIDKGLVAKSSCPAKYMLTEAGKEIARECLLRSGIVDSKEISASLTGFSDLDQNDKLDKT
LSTINLSSTEVRHTTSVRKRPVPSSQSTGKKKMNIPSESLDRFIRMGFSKEQVIRAYSEV
LETSQSKDISLIWPSVLCRLREDQVYGQVGTCRIDDRLSETTCNGTVNSAKPSHLADFAD
CSNTLRACSSNLVDEQLPCLETRSNLLVAPPLAYGEQFEDVYEVVLVLDDREQFTSRGSR
SRKIIENISTQFKIEIEVRRLPVGDAIWIARNKVIGTEYVLDFIVERKNVEDLQSSIRDN
RYRDQKLRILRCGLKKMMYVVEGDPNSCTAADSIKTACFTTEILEGFDVLRTSGLGETLR
KYGCLTQAINQYYKCMDNKRSNTRLCPCFNEFIRRCEDLDKMTVSDVFATQLMQVPQVTE
EVAIAVLDMYPTLSSLARAYSLLDGDVRAQEEMLKEQSNNLVNATASKKIFELIWSN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggagtaccaaaagaaggtggtatgcccggagaacgaagagttggcagcgtacatgtgg
aacaagaagcaagaaatggctgaaaaccccaaagggatttcggataatatcttaaaaact
cttcacaaagcctataccaatctctgcaattccaagacccctattaagactctcaaagag
ttttctgagatcaagggtgttggaaaatggattttgaggcaaatgaaaggtttttttgaa
gctgatgatcctggtgcttcatcatccgaggagagtgataactccggtgagaaagggaag
agaaataagggaacaaagcgttacatgcctcaaaagaattctgtggcctatgccttactg
atcacactgtacaggtgtacaacaaacggtgaaaaatttatgcataagcaggagcttatt
gatgctactgaagctagtggtctttctcgtgcacctgttggacctgagaaaggaaaagga
aaagctggacaatttggctcgccaagggactggtacagcggatggagctgcatggggaag
ttaatagacaaaggacttgttgctaagtctagctgccctgcaaaatatatgctcactgaa
gcaggcaaagagattgcacgggaatgtcttttgaggtcaggaattgttgattccaaagaa
atatcggcatctttgacaggattttcagatttggatcaaaatgacaagctagataagact
ttgtcaactattaacttatcaagtaccgaagttcgacatactacttcagtgagaaaaagg
ccagtgccatcatctcaatcgactggcaaaaagaaaatgaacattccatctgaatctctt
gacaggtttattcgaatgggcttctccaaggaacaagtaattcgggcttactctgaagtg
ttagaaacatcacagagcaaagatatatcattaatctggccgtctgttctgtgtcgcctt
cgagaagatcaagtttatggtcaagttggtacctgtagaattgatgatagactatccgag
actacttgcaatggaacagtaaatagtgcaaagccttctcatcttgctgattttgcagat
tgttcgaatactttgagagcttgttcatccaatctagttgatgagcaattaccatgtctg
gaaactagatccaatctcttggtggcgccgccattggcctatggagagcaatttgaagat
gtttatgaagtagttttggtattagatgatcgggaacagtttacttctcgagggtcgcgt
tccaggaagataattgaaaacatcagcacgcaatttaaaattgaaatagaggttaggcgc
ttgcctgttggtgatgcaatctggatagctcgtaacaaagttattggcactgaatacgtt
cttgactttattgtggagaggaagaatgttgaagatttgcaaagttcaatcagggataac
cgatatagagatcagaagctgcggattttgaggtgtggactcaagaagatgatgtatgtc
gttgaaggagatccaaattcttgtactgctgccgatagcatcaaaacagcttgtttcaca
accgagatcttggagggctttgatgtgctaagaacaagtggtttgggagagacattgaga
aagtacggctgtcttactcaagcaatcaatcagtactacaaatgcatggataacaagcgg
tccaataccaggctgtgcccctgctttaatgagtttattaggaggtgtgaggatctcgat
aaaatgacagtaagcgatgtgtttgccacccaactcatgcaggtcccacaagtgacagag
gaagttgctattgctgttcttgatatgtatccaacactttcatctcttgcgcgtgcttac
tcgttgcttgatggcgatgttcgtgcgcaagaggaaatgctcaaggagcagagcaacaac
ttagtcaatgcaactgctagcaaaaagattttcgagttgatttggagcaattga
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