Nicotiana tabacum (common tobacco): 107830702
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Entry
107830702 CDS
T04643
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107830702
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107830702
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
3H
NosD
Conotoxin
SARAF
Motif
Other DBs
NCBI-GeneID:
107830702
NCBI-ProteinID:
XP_016513823
UniProt:
A0A1S4DKA6
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Position
Un
AA seq
480 aa
AA seq
DB search
MKKNYKHSPLIFLLVLLLIFFTAFSMVSVEARKHHTKKSKIHHKHRNRNNKQKNGGGNKA
PDCSDSPSPAPSHGFYPTQFPIFDILSFGAKGDGVSDDSKALEGAWEAACKVQGATLHIP
SEFQFLINPITLQGPCMPNFIFQVDGTLLAPSKVGTWPKSSLFQWLNFKWMHNFTIQGTG
TFDGQGYNWWKLSQIDYFQEMKTSKSIPDIKPTVLRFYASYNVTVRDIKIMNSPQCHLKF
DNSKGVKINNVTISAPGSSPNTDGIHLQNSQDVEIHHSNIGTGDDCVSIQTGCSNIHVHH
INCGPGHGISLGGLGKDKSVACVSDIIVENVNLESTMYGARIKTWQGGLGSVKNISFSNI
QVSDVKVPIMIDQYYCDKHVCKNQTGAVAISNVKFNQITGTYSAKPIHLACSNSILCTDV
DLIDIQLKPSFNYRGIQQGLCWNSYGKSQAPLLPSSMDYCVRRGSGFVRRISRSHENVCS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaattataaacactctcctctcatctttcttctcgttcttttacttattttc
ttcactgcattttcaatggtatcagttgaggctaggaaacaccatacaaagaagagcaaa
atacaccacaaacataggaataggaataataagcagaaaaatggaggtggaaataaagca
ccagattgttcagactctccttctccagctccttctcatggtttttaccctacacagttt
cccatttttgacatcttgtcctttggagccaaaggtgatggagtttctgatgattccaag
gcacttgaaggagcatgggaagctgcttgcaaagtccaaggggctactctacacattcct
tcagaattccaattcttaatcaatcccattacacttcaaggaccatgcatgcctaacttt
atttttcaggtagatggaactctcttggctccttcaaaagtaggaacctggcccaaatcc
agcttgttccaatggttaaatttcaagtggatgcacaattttaccatccaaggaactggc
acttttgatggccaaggctataactggtggaaactttctcaaattgattatttccaggaa
atgaagacatctaaaagcattcctgatataaaaccgacagttttacgattttatgctagc
tataatgtgacagttcgtgatatcaagattatgaatagtcctcaatgtcacctaaaattt
gacaactctaaaggagtaaaaatcaataacgttacaatctctgcaccaggaagtagccca
aacactgatggtattcaccttcaaaattctcaagatgttgagatccatcattccaatata
ggaacaggagatgattgcgtgtcaattcaaactggttgctctaatattcatgtacatcac
ataaattgtggtcctggacatgggataagcctcggaggactaggtaaagataaaagcgtt
gcatgcgtttcagacatcattgttgagaacgtgaacttggaaagcactatgtatggtgca
aggataaagacatggcagggtggtcttggatccgtcaagaacatatcattttcgaacatt
caagtatcagatgttaaggttccaatcatgattgatcaatattactgcgacaagcatgtg
tgcaagaatcaaacaggagctgtagcaatatccaacgttaaattcaatcagataacagga
acttactctgccaaaccaattcatctagcttgcagtaactcaattctatgcactgacgtt
gatctaattgacattcaattaaaaccatcgtttaattatcggggaattcagcagggattg
tgctggaattcttatggaaaatcacaagcaccacttcttccttcaagtatggattattgt
gtaagaaggggaagtggctttgttagaagaatatcaagatcccatgaaaatgtctgctcg
taa
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