Nicotiana tabacum (common tobacco): 107830809
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Entry
107830809 CDS
T04643
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107830809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107830809
03036 Chromosome and associated proteins [BR:
nta03036
]
107830809
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107830809
Coactivators
SAGA/TFTC/STAGA complex
107830809
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107830809
STAGA complex
107830809
TFTC complex
107830809
SAGA complex
107830809
SLIK complex
107830809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_VPS8
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR75_1st
ASA1
PAC11
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
LisH_PAC1
PALB2_WD40
Beta-prop_ACSF4
LisH_SSDP
LisH
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
107830809
NCBI-ProteinID:
XP_075100686
UniProt:
A0AC58TTY7
LinkDB
All DBs
Position
22:complement(27283213..27296174)
Genome browser
AA seq
666 aa
AA seq
DB search
MDEEEIEKAVVAYLKKKGFKQTELAFQEEQQLNKNTNSQVDPDVTKKILSFSEFETGPER
YQEEYSKLRSWAYSSLDLYKHELLRVLYPVFIHCFMELVARGHIQEARAFFDSYREDHEM
MHLRDLQKLEGVLSPSHLKEMEFAHSIRLSKVNIKMCQYSYDLLLQYLHKTESITMLGII
NERINFQVSPGQPGSISDDAEVVTLVGSGPDASLLNQKEIHWGLLEDSLEERLEKTGGMV
PDSEKFDGDPKEGEVEENKKKSVEGGKQGASLKKQKKDKVGVATGKSSRTEGSTVTTAPR
VKPELALPAIPAEVEHSILEDLRNRVQLSNAALPSVSFYTFVNTHNGLNCASISHDGSLV
AGGFSDSSLKVWDMAKLGQQTGPSFLQGETDSPSSEHVLGSSGGRRCYTLFQGHSGPVYS
ASFSPYGDFLLSSSSDSTIRLWSTRLNANLVCYKGHNYPVWDVQFSPVGHYFASCSHDRT
ARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGDCVRIFIGH
RSMILSLAMSPDGRYMASGDEDGTVMMWDLSSGRCITPLVGHSSCVWSLAFSGEGSLLAS
GSADCTVKLWDVTTSTKAPLKEENKPGINNRLRSLKTLPTKATPVYALRFSRRNLLFAAG
AFSKGA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagaaatagagaaagcagtggtagcgtatttgaagaagaagggtttcaag
caaactgagcttgcttttcaagaagaacagcaacttaataaaaacacaaattcccaggtt
gaccctgacgttaccaaaaaaatcctctctttctctgaatttgaaactggtcctgaacgg
taccaagaagaatatagcaagcttcgatcatgggcttatagttcactggatttatataag
catgagttgcttcgtgttttatatcctgtgtttattcattgtttcatggaacttgtcgct
agaggtcatattcaagaagctcgagccttttttgatagttaccgtgaagaccatgagatg
atgcatttgcgtgatctgcagaagttagaaggtgttctctcaccgtcccatctaaaggaa
atggaatttgctcattctatacggcttagcaaagtgaacataaagatgtgtcagtactct
tatgaccttttgctgcaatacttgcacaagacagagtctattacaatgcttggaatcatc
aatgagcgcataaattttcaagtttctcctggacagcctggctccatatctgatgatgca
gaagttgtaactctcgttggaagtggccctgatgctagcctcttaaatcagaaagaaatt
cattgggggctgcttgaagactctttagaagaacggttagaaaagacaggaggtatggtt
ccagattcggaaaagtttgatggagatcctaaggaaggagaagtggaagaaaacaagaag
aagtcagttgaaggtggaaaacaaggtgcatctcttaaaaagcaaaagaaggacaaagtt
ggggttgcaacagggaaatcttctcgtacagagggcagcacagtgacaactgcaccacgt
gtcaaaccggaacttgctttacctgctattcctgcagaggtagaacattctattctggaa
gacttgaggaaccgtgtgcagttgagtaatgcagcattgccctctgttagcttctataca
tttgttaatacacataatggactaaactgtgcatcaatatcacatgacggatcactggtg
gctggtggattctcagactcgtctttgaaggtttgggacatggcaaagcttgggcaacaa
actggtccatcttttttgcagggggaaactgattcaccttctagtgagcatgtgcttggc
tcaagtggtggaagaagatgttatacattatttcagggccattctgggcctgtttattct
gcgtcctttagtccgtacggggattttcttctatcttcttcatcagattcaacaattcgc
ttatggagcacaaggttaaatgctaatcttgtttgctacaaaggccacaattacccagta
tgggatgttcagtttagtccagttggtcattattttgccagttgttcacatgaccgcact
gcaagaatctggtctatggacagaatacagcctctgagaataatggccggacacttatca
gatgtggattgtgtgcaatggcatgcaaactgcaattacattgcaactggatcaagtgac
aaaactgtacgcttgtgggatgtccaaagtggcgactgtgtcaggattttcattggtcat
aggagtatgatcctatcattggcaatgtctcctgatggtcgatatatggcatcaggtgat
gaagatggaacagtcatgatgtgggatctctcaagtggacgttgtattactcctttggtt
ggacactcctcctgtgtatggtcacttgcttttagtggtgaaggttcacttcttgcatct
ggctctgctgattgcactgtgaaattatgggatgtaaccacaagcacaaaagcgccactg
aaagaagagaacaaacctggaattaacaatagacttcgatcattgaagaccctgcctaca
aaagctactccagtctatgctctgcgcttttctcgaagaaatcttctatttgctgctgga
gctttctcgaagggtgcatga
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