Nicotiana tabacum (common tobacco): 107830809
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Entry
107830809 CDS
T04643
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107830809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107830809
03036 Chromosome and associated proteins [BR:
nta03036
]
107830809
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107830809
Coactivators
SAGA/TFTC/STAGA complex
107830809
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107830809
STAGA complex
107830809
TFTC complex
107830809
SAGA complex
107830809
SLIK complex
107830809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Tricorn_2nd
PALB2_WD40
WD_LRWD1
RAB3GAP2_N
Beta-prop_ACSF4
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
107830809
NCBI-ProteinID:
XP_016513947
UniProt:
A0A1S4DKP1
LinkDB
All DBs
Position
Un
AA seq
567 aa
AA seq
DB search
MELVARGHIQEARAFFDSYREDHEMMHLRDLQKLEGVLSPSHLKEMEFAHSIRLSKVNIK
MCQYSYDLLLQYLHKTESITMLGIINERINFQVSPGQPGSISDDAEVVTLVGSGPDASLL
NQKEIHWGLLEDSLEERLEKTGGMVPDSEKFDGDPKEGEVEENKKKSVEGGKQGASLKKQ
KKDKVGVATGKSSRTEGSTVTTAPRVKPELALPAIPAEVEHSILEDLRNRVQLSNAALPS
VSFYTFVNTHNGLNCASISHDGSLVAGGFSDSSLKVWDMAKLGQQTGPLQLANQTXEHVL
GSSGGRRCYTLFQGHSGPVYSASFSPYGDFLLSSSSDSTIRLWSTRLNANLVCYKGHNYP
VWDVQFSPVGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSS
DKTVRLWDVQSGDCVRIFIGHRSMILSLAMSPDGRYMASGDEDGTVMMWDLSSGRCITPL
VGHSSCVWSLAFSGEGSLLASGSADCTVKLWDVTTSTKAPLKEENKPGINNRLRSLKTLP
TKATPVYALRFSRRNLLFAAGAFSKGA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgtcgctagaggtcatattcaagaagctcgagccttttttgatagttaccgt
gaagaccatgagatgatgcatttgcgtgatctgcagaagttagaaggtgttctctcaccg
tcccatctaaaggaaatggaatttgctcattctatacggcttagcaaagtgaacataaag
atgtgccagtactcgtatgaccttttgctgcaatacttgcacaagacagagtctattaca
atgcttggaatcatcaatgagcgcataaattttcaagtttctcctggacagcctggctcc
atatctgatgatgcagaagttgtaactctcgttggaagtggccctgatgctagcctctta
aatcagaaagaaattcattgggggctgcttgaagactctttagaagaacggttagaaaag
acaggaggtatggttccagattcggaaaagtttgatggagatcctaaggaaggagaagtg
gaagaaaacaagaagaagtcagttgaaggtggaaaacaaggtgcatctcttaaaaagcaa
aagaaggacaaagttggggttgcaacagggaaatcttctcgtacagagggcagcacagtg
acaactgcaccacgtgtcaaaccggaacttgctttacctgctattcctgcagaggtagaa
cattctattctggaagacttgaggaaccgtgtgcagttgagtaatgcagcattgccctct
gttagcttctatacatttgttaatacacataatggactaaactgtgcatcaatatcacat
gacggatcactggtggctggtggattctcagactcgtctttgaaggtttgggacatggca
aagcttgggcaacaaactggtccattacaactggcaaaccagacangtgagcatgtgctt
ggctcaagtggtggaagaagatgttatacattatttcagggccattctgggcctgtttat
tctgcgtcctttagtccgtacggggattttcttctatcttcttcatcagattcaacaatt
cgcttatggagcacaaggttaaatgctaatcttgtttgctacaaaggccacaattaccca
gtatgggatgttcagtttagtccagttggtcattattttgccagttgttcacatgaccgc
actgcaagaatctggtctatggacagaatacagcctctgagaataatggccggacactta
tcagatgtggattgtgtgcaatggcatgcaaactgcaattacattgcaactggatcaagt
gacaaaactgtacgcttgtgggatgtccaaagtggcgactgtgtcaggattttcattggt
cataggagtatgatcctatcattggcaatgtctcctgatggtcgatatatggcatcaggt
gatgaagatggaacagtcatgatgtgggatctctcaagtggacgttgtattactcctttg
gttggacactcctcctgtgtatggtcacttgcttttagtggtgaaggttcacttcttgca
tctggctctgctgattgcactgtgaaattatgggatgtaaccacaagcacaaaagcgcca
ctgaaagaagagaacaaacctggaattaacaatagacttcgatcattgaagaccctgcct
acaaaagctactccagtctatgctctgcgcttttctcgaagaaatcttctatttgctgct
ggagctttctcgaagggtgcatga
DBGET
integrated database retrieval system
