Nicotiana tabacum (common tobacco): 107831305
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Entry
107831305 CDS
T04643
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
nta03440
Homologous recombination
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107831305
03420 Nucleotide excision repair
107831305
03430 Mismatch repair
107831305
03440 Homologous recombination
107831305
03460 Fanconi anemia pathway
107831305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nta03000
]
107831305
03032 DNA replication proteins [BR:
nta03032
]
107831305
03400 DNA repair and recombination proteins [BR:
nta03400
]
107831305
Transcription factors [BR:
nta03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107831305
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107831305
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107831305
MMR (mismatch excision repair)
107831305
DSBR (double strand breaks repair)
HR (homologous recombination)
107831305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
OB_MEIOB_N
DUF223
Motif
Other DBs
NCBI-GeneID:
107831305
NCBI-ProteinID:
XP_016514546
UniProt:
A0A1S4DMA0
LinkDB
All DBs
Position
Un
AA seq
638 aa
AA seq
DB search
MPVNLTANAIPAIIAGDVNSKPVVQVLDIKLIGAAADRYGLLISDSESSQQAMLAAQLND
RVKTGRVRKTSVIQLIEYICTTVKNRKIIVVINMETIIPECEIIGNPKALVESNFGAQKA
ISNGVSGSAIFNNGNLSAQRSGQTSFANSNNLSSLHSGNSMQNYPPAIQPAYQPPPNYKS
HGTIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFSFDLLDSDG
GEIRVTCFNAVVDRFYDKIEAGKVYMISKGSLKPAQKNFNHLKNEWEIFLEITSTVDVCP
DEDATIPRQQFSFRPISDIESAESNSIIDVIGIVIAVNPSVPILRKNGMETQRRILNLKD
QSRRSVELTLWGDFCNREGQKLQEMAEAGFSPVLAVKAAKVSDFTGKSIGTISSTQLFID
PDFAEAQTLREWFDQGGKDVASQSISRENMPAGSKSEIRKTVSQIKDEGLGRSDKPDWIT
VKATITFIKTESFYYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFEECDYRYLLQAQ
IQDHTGLTWVTAFQESGEEILGRPAKELHMMNEEADGNRFSEIIRKCLFTQFLFRLKIKE
ELYGDEQKVKITVIKAEKVKHSAESRYLLDLISKFCPS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaacttgacggcgaacgcgatcccggctattatcgccggcgacgtgaactca
aagccagtggttcaggtattggacatcaagctaatcggcgccgcagcggatcggtacgga
ctcctaatctcagattctgagtcgagtcagcaggctatgctggctgctcagcttaatgac
cgagtcaaaacgggccgcgttcgcaaaacctccgtcattcagttgattgagtacatttgt
accactgttaaaaatcgcaaaattattgttgtcatcaacatggaaactattatacctgaa
tgtgaaataattgggaatcctaaagcgcttgtagaatctaattttggagctcagaaagct
atatctaatggcgtttctgggtctgcaatctttaacaatggtaacttgagtgctcaaaga
tctggccaaacaagctttgctaacagcaacaatttgagctccctacattcaggtaatagc
atgcagaactacccacctgcaattcaacctgcatatcagcctcctccaaattacaaaagc
catgggacaataatgaagaatgaagcacctgcccgcattattccaattgctgctttgaac
ccctatcagggtcggtgggctattaaggctagagtgactgcaaagggggatctacgtcgc
tataataattccagaggagatggaaaggtcttctcatttgatctccttgactcagatggg
ggtgaaatacgtgtcacttgctttaatgcggttgttgatcgcttttatgacaaaattgaa
gctggaaaagtgtacatgatatcaaaaggcagcttgaaacctgctcagaagaacttcaac
catctgaagaatgaatgggaaatattcttggagataacttcaaccgtagatgtctgtcca
gatgaagatgccactataccaagacagcagttctcatttagacctattagtgacattgaa
agtgcagaaagcaattcaatcatagatgtgattggaattgtaatagctgtcaatccttct
gttccgatcctgagaaagaatggaatggaaactcaaagaagaatcttgaatctaaaggat
cagtctaggcgaagtgttgagctgacactatggggagacttctgtaacagggaaggtcaa
aagctgcaagaaatggcagaagctgggttttcccctgttttagctgtcaaagctgcaaaa
gttagtgacttcactgggaaatccattggaaccatttcttccactcaactgttcatagat
ccagattttgcagaggctcaaactctaagagaatggtttgatcagggaggaaaagatgtt
gcttctcaatctatatctagggaaaacatgcctgcaggatcaaaaagtgagatacgtaag
accgtgtctcagatcaaggatgaagggcttggtaggtcagataaaccagactggattaca
gttaaggcaactataacattcatcaaaaccgaaagcttctattacactgcttgccctctg
atgattggagatagacaatgtaataagaaagttaccaggtcaggaaactcgagatggcaa
tgtgataggtgcaatcaagagtttgaggaatgtgattacagataccttcttcaagctcaa
attcaagatcatactgggttgacatgggtgacagctttccaggaatctggggaagagatt
ttgggtcgtcccgcaaaggagctacacatgatgaatgaagaggcggatggtaacagattt
tctgaaattattagaaaatgtctctttacacaatttctattcaggcttaaaatcaaagag
gaactttatggtgatgagcagaaggtgaagattacagttatcaaggcagagaaagtgaaa
cattctgcagaaagcagatatctccttgatttaatttcaaaattctgtccttcttga
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