Nicotiana tabacum (common tobacco): 107831485
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Entry
107831485 CDS
T04643
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107831485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107831485
03051 Proteasome [BR:
nta03051
]
107831485
Membrane trafficking [BR:
nta04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107831485
Proteasome [BR:
nta03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107831485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
Ddi2_HDD
Rad60-SLD_2
TBK1_ULD
Mucin
Motif
Other DBs
NCBI-GeneID:
107831485
NCBI-ProteinID:
XP_016514740
UniProt:
A0A1S4DMW4
LinkDB
All DBs
Position
Un
AA seq
561 aa
AA seq
DB search
MGGGDTSAAAKEDNANNATGGDQKVVTINVRCSNGSKFSVQVTLESSVGTFKSTLAQHSD
IPAEQQRLIYKGRILKDEQTLESYGLEADHTVHLVRGFAPAASANTASATNTGNPNTNQN
APPDAAPNVGGPFAGSGLGASLFPGLGSGGGGGGLFGAGLPDFEQVQQQLTQNPNMMRDI
LNMPLVQNMMNNPEIIRNMIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPELMR
EMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDARNDVGSNPFAALLGAQ
GAGQGRDQSTNPPTTGSETTANTPAPNTNPLPNPWASAGTGAGQTNTTARSNAAGETRAP
PPPAGLGGLALPDLERMLGGMQGGMPDAASLNQMMQNPAVSQMMQSLLSNPQYMNQILGL
NPQLRNMLDSNSQLREMMQNPEFIRQLTSPETMQQLMTFQQGLLSQLGRQPTNQPGQNAG
GAALDNMGMEMLMNMFGGLGSGGLGGVPNRSNVPPEELYATQLAQLQDMGFFDTQENIRA
LVATAGNVHAAVERLLGNLGQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggtgatactagtgctgcggcgaaagaggataacgctaataatgccaccggc
ggcgatcaaaaagttgttacgattaacgtccgatgttccaacggctcaaaattctccgtt
caggtgactctagaatccagtgttggaaccttcaagtccacccttgctcagcactccgac
attcctgccgagcagcagagattgatctataaaggccggatcttaaaggacgaacaaacc
ctagaaagctacggtcttgaggcagatcacactgttcatttagttcgaggttttgctcca
gctgcttctgctaatactgcaagtgcaaccaatactggaaatccaaatactaatcagaat
gcaccccctgatgccgccccaaatgtaggcggaccatttgctggatcaggccttggggct
tcactgtttcctggtcttggaagtggcggcggcggcggtggtttatttggagctggcctt
cctgattttgagcaggtccagcagcagttgactcaaaaccccaacatgatgagagatatc
ctgaacatgcctctcgttcagaatatgatgaataacccagaaatcatccgtaacatgatc
atgaacaatcctcaaatgcgagagatcatggatcgtaatccagagcttgctcacgtactc
aatgatcctgctactcttcgccagacaatggaggctgcacggaaccctgagcttatgcgt
gagatgatgcgcaatactgacagggcaatgagcaatattgaatcttctcccgagggattt
aacatgctgaggcgcatgtatgaaaatgtccaagagcctttcctaaatgcaacaactatg
gctggagatgcaagaaatgatgtgggctcgaacccgtttgcagctcttttgggagcccag
ggtgcggggcaaggcagagaccagtctacaaatcctccaactactggttctgagaccact
gctaacacacctgctccaaataccaatccacttcctaatccttgggcttctgctggcact
ggagctggccaaactaataccactgctaggtcaaatgctgctggggaaactagggcacca
ccaccgcctgctggcttaggtgggcttgctctcccagatcttgagcgaatgctgggtggc
atgcaaggtggtatgccagatgctgcttcactaaatcagatgatgcagaacccagccgtc
tcgcagatgatgcagtctctgctctcaaatcctcaatacatgaaccagattcttgggctc
aacccacagctaaggaacatgcttgattccaactcccagctacgagaaatgatgcaaaac
cctgaatttattcggcagttgacttcgcctgaaacaatgcagcaacttatgactttccag
caagggcttttgtctcaacttggtcgacaaccaacgaaccaaccgggtcagaatgctgga
ggtgcagccctcgacaacatgggaatggaaatgctgatgaacatgtttggagggcttggg
tcgggaggtttgggtggtgtccccaacagatccaatgtgcctccggaggaattatatgcc
actcaactcgcgcagttacaagatatgggtttctttgacactcaagaaaatatcagggca
ttggttgccactgcgggcaatgttcatgctgcagtagagagacttcttggaaatcttgga
cagtaa
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