Nicotiana tabacum (common tobacco): 107831503
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Entry
107831503 CDS
T04643
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nta04812
]
107831503
Cytoskeleton proteins [BR:
nta04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107831503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
eIF2A
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
PROPPIN
Beta-prop_DCAF12
VPS8_N
Csm6_6H
Motif
Other DBs
NCBI-GeneID:
107831503
NCBI-ProteinID:
XP_016514754
UniProt:
A0A1S4DNM7
LinkDB
All DBs
Position
Un
AA seq
818 aa
AA seq
DB search
MPGFDFSMTTTKRAYKLQEFVAHSLSVNCLKIGRKSSRVLVTGGEDHKVNLWSIGKPDAV
LSLSGHSSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPF
GEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNTIRFTPDGRWVVSGGEDSTVKIWDL
TAGKLLHDFKCHEGQIRSIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETTGVRC
MAFNTDGRTLLCGLHENLKVFSWEPIRYHDTVDVGWSTLSDLSIHEGKLLGCSYNQSCVG
VWVVDISCLEPYTMDSTTRLNGHSVVKSNLRANLSTPAEEATDASFGRLLSSPNSDPVKE
SKYFERLSLSHNKDLQKDSTTITTITDTPDTSQKINLSTGPRAPPISSRAVPNTTGVKRN
SAKAQATENAFIVNKSEIIPVLVPRNNERMELAPERRKGGVAGREMPQRLQPKVSDWKSP
TPNENLGRPTAAVQSEVEVPKAIESSSPADRNIFPFVKCSIFGNAATDRNVNDDKNLVST
KHEMDTAPESLSGHQIEDYEARGNILNRNPYSMQGQLRGRTRSTVANWEKRDSVPNYEGL
ASSIVRTVPDPDVVPTNMNLTHRNSIIIHEKREDPLSAVSEVVVAADEDTIADLMEQHNQ
FVGSLQSRLAKLQVVYQYWQRHDIKGAVSALEKMADNAVLADLVSFLTEKNDVITLEICT
CLLPLLTGLLQSKLDRHQDISLTMLLKLAKVFGSLIYTSLSTPTSVGVDIEAEKRMERCN
LCFIELEKVKNHLPALSRRGGSIAKSAQELSLALQEVS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttttgatttctcgatgacaaccactaaacgtgcttacaagctacaggaattt
gtagcacattctttaagtgtgaattgcttaaagatagggaggaaatcatccagggttctt
gtaaccgggggagaagatcacaaagttaacctctggtccattggcaagcctgatgccgta
ttgagtttgtcaggtcattcaagcggaattgattcagttagctttgattcttcagaagtt
ctggtagctgcaggagcagcaagtggtactatcaagctttgggatttagaggaggccaag
attgttcggactctcactggacatagatccaattgtatatcattggacttccatcccttt
ggtgagttctttgcatctgggtctctggacacaaatctaaagatatgggatattagacgc
aaagggtgcattcacacatacaaagggcacactagaggtgtcaacaccatcaggttcacg
ccagatggccgctgggttgtatctggtggagaagacagtaccgtaaagatatgggatttg
actgcaggaaagcttttacatgatttcaaatgtcatgaaggacaaattcggtccatagac
tttcatcctcatgaatttttactggcaacaggttctgctgacaaaaccgttaaattttgg
gaccttgaaacttttgaactcataggttctgctggacctgagacaacaggagtgcgttgc
atggcctttaatactgatggaagaacccttctttgtggtttacatgagaatttgaaggtt
ttctcgtgggaaccaattaggtatcatgatacagtagatgttggctggtctacattgtct
gatcttagtattcatgaaggaaaacttcttggatgttcttacaatcaaagttgtgttgga
gtgtgggttgtcgatatttcatgtcttgaaccatatacaatggatagtactacacgatta
aatggtcactcagtagtgaaatccaatttgagagcgaatttatccactccggctgaggag
gctacagatgcaagtttcgggagactattaagttccccaaattctgatcctgtgaaagaa
tccaagtattttgaaagactttctttgtcacacaacaaggatcttcagaaggattctact
actattactactatcacggatactcctgacacctcacaaaaaataaatctcagtactggt
ccaagagcacctccaatcagctcaagagcagttcctaatacaactggtgtaaagaggaat
tcagcaaaagcccaggcaacagaaaatgcttttattgtcaataagtcagagataatacct
gttcttgtcccaagaaataatgaaagaatggagctagcacccgaacgcaggaaaggagga
gttgcaggaagggaaatgccacaaagattgcagccaaaagtatctgattggaagtctcct
actcccaacgaaaaccttgggaggccaactgctgcagtgcagtctgaagttgaagtacct
aaggctattgaaagtagcagtcctgcagataggaacattttcccttttgttaaatgctcg
atatttggaaatgcggcaactgatagaaacgtgaatgatgacaagaatttagtttccaca
aaacatgaaatggatacagcaccagaatcgctctccggacaccaaattgaagattatgaa
gcccgtggaaatattctaaataggaatccttattccatgcaaggtcaactaagaggaagg
acacggtctactgttgcaaactgggaaaagagagacagcgttcctaattatgagggtctt
gcttcctccattgtcaggacggtacctgatccggatgtggttccaaccaatatgaattta
actcatcgtaattcaataatcatacatgaaaagagagaagatcccctttcagctgtaagt
gaggtggttgttgctgccgatgaggataccattgctgacttgatggaacagcacaaccaa
tttgttggctcgctgcaatctcgtttggctaaattacaggttgtgtaccagtactggcaa
agacatgatattaaaggggcagtaagtgcactggagaagatggcagataatgctgtgctt
gctgatttagtgagcttcttaactgagaaaaatgacgttatcacattagagatttgcaca
tgcctattaccacttctcacggggctgcttcagagcaagttggataggcatcaagatatt
tcattgaccatgctgctcaaacttgctaaagtatttggttcattgatttatacttcgttg
tctactccaacatcagttggtgttgatattgaggcggagaaaaggatggagcgctgcaat
ctctgctttattgagcttgaaaaagtcaagaaccatctgcctgctctttctagaagagga
ggatccattgccaaatctgctcaggaactaagtctagcacttcaagaagtttcatga
DBGET
integrated database retrieval system
