Nicotiana tabacum (common tobacco): 107831685
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Entry
107831685 CDS
T04643
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107831685
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107831685
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
107831685
NCBI-ProteinID:
XP_016514954
UniProt:
A0A1S4DP88
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Position
Un
AA seq
575 aa
AA seq
DB search
MNSYLLDALFNVLICTTYKVILERDDQIELSFSRTWDVSLQDKLIPLNIDKRFIMLKGSS
GFYSYAIYEHLEVWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPDRGQPL
AYPEAVLLVNPVEPELKGEVDDKYQYSSEDKDLKVHGWICMDPPLGFWIIIPSDEFRSGG
PLKQNLTSHVGPTALSVFLSAHYAGEDLVPKFGEGESWKKIFGPVFIYLNSVTGGKDPLI
LWEDAKEQMLVEVQSWPYSFPASEDFPSSSQRGNISGRLLVQDRYFKDDKIYASGAYVGL
APPGEAGSWQRECKDYQFWTKADEEGYYVISDIRAGDYNLYAFVPGFIGDYKSDTKVTIT
SGCSIEMDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYINKLFVNHPDKFRQYGL
WERYTDLYPNGDIVFTIGESDYKKDWFFAQVTRKKDEKTYTGTTWQIKFKLDSVNRNETY
SLRLALASVAQAELQVRINDSSMNTPLFSSGLIGKDNAIARHGIHGLYWLFNVNLQGDML
VEGENTIYLTQANATSPFQGIMYDYIRLEAPPSHD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctaccttttggatgctctgttcaacgtgctcatatgcacaacctataaggtc
atattggaaagagatgatcaaatagagctttccttctcgaggacttgggatgtgtcactt
caggacaagctcattcccctaaacatagacaaaaggtttataatgcttaaaggttcctca
ggtttctattcttatgcaatatatgaacatttagaggtatggcctggtttcaaccttgac
gagactaggattgcattcaagctcagaaaagacaagtttcattacatggcaatggcagat
aacaggcagagatacatgcccttacctgatgacaggttaccagatagaggacaaccactt
gcttatcctgaagcagtcctgcttgtcaatcctgtggagcctgagttaaaaggcgaggtt
gatgacaagtatcaatactcaagtgaggacaaagatttaaaagttcatggatggatttgt
atggatccaccactggggttctggataattattcctagtgacgaatttcgatctggggga
ccccttaaacaaaacctcacttctcatgttggtccaactgctctttctgtgtttctcagt
gcccactatgcaggagaagatttggttccaaagtttggagaaggagagtcatggaaaaaa
atctttggaccagtttttatatatcttaattctgtcactggagggaaggatcccctaatt
ctctgggaggatgccaaagaacagatgctggtagaagttcaaagctggccttacagtttt
ccagcatctgaggattttccatcatcatctcaacgcggtaatattagtggaagattgtta
gtccaagacaggtacttcaaagatgataagatatatgcttctggtgcatatgttggcttg
gctccaccaggagaagctggttcatggcaaagagaatgcaaggactatcaattctggaca
aaagcagatgaggaaggctattatgtaatcagtgacatacgagcaggcgactataacttg
tatgcatttgtccctggattcattggagattacaaaagtgacactaaagttacaattacc
tcaggttgcagcattgagatggatgatcttgtctttgaacccccaagaaatggacctaca
ctttgggaaattggcattcctgaccgctctgcacgagagttttatattcctgatccagat
ccaaaatatatcaacaaactctttgttaatcatcctgataagtttagacagtacgggcta
tgggagagatacactgacttgtatccaaatggtgatatagtctttacaattggagagagt
gactataaaaaagattggttctttgctcaagtcactaggaaaaaggatgagaagacgtat
acaggaacaacatggcaaataaaattcaaacttgacagtgttaatcgaaatgaaacctat
tcactgagattggcacttgcatctgtagcacaagctgaattacaagttcgcatcaatgat
tcaagcatgaatactcctctattctcaagtggattgatagggaaggataacgcgatagca
aggcatggaattcatggtctctactggctgttcaatgtgaatttgcagggtgacatgctt
gttgaaggggaaaatacaatatatttgacacaagcaaatgcaactagtcctttccaaggg
atcatgtatgattatatacgtttagaagcacctccttcccatgactaa
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