KEGG   Nicotiana tabacum (common tobacco): 107831957
Entry
107831957         CDS       T04643                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03420  Nucleotide excision repair
nta04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107831957
  09124 Replication and repair
   03420 Nucleotide excision repair
    107831957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:nta03051]
    107831957
   03400 DNA repair and recombination proteins [BR:nta03400]
    107831957
Proteasome [BR:nta03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    107831957
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      107831957
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 UBA_RAD5A Dsc3_N Rad60-SLD_2 TECR_N CUE UBA_3 Ubiquitin_4 Crinkler
Other DBs
NCBI-GeneID: 107831957
NCBI-ProteinID: XP_016515235
UniProt: A0A1S4DP97
LinkDB
Position
Un
AA seq 387 aa
MKIFVKTLKGTHFEIEVKPEDTVADVKKNIETAQGQAVYPAAQQMLIHQGKVLKDTATLE
ENKVAENSFVVIMLAKNKVSTSATSAAQPAPSNTAQPATSTGQPTQTVTAPQATAASLAP
AQSAPQSAPTPAAAPVSSNPVTDVYGQAASNLVAGSTLEATVQQILDMGGGSWDRDTVIR
ALRAAFNNPERAIEYLYSGIPEQAEIPPAAPAPALAPASGQAVNPPVQASQPAVPSGGPN
ANPLDLFPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQANPQILQPMLQELGKQNPQL
MRLIQEHQADFLRLINEPVESEGNVPGQPAGAIPQAVTVTPEEREAIERLEAMGFDRALV
LQVFFACNKNEELAANYLLDHMHEFDE
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgaagatttttgtgaagactttgaaaggcactcactttgagatcgaagtgaaacccgaa
gacacggttgctgatgtgaagaaaaacatagaaacagctcaaggtcaagctgtctacccg
gctgcacaacagatgcttatccaccagggtaaagttctcaaggacactgcaacgttggag
gaaaacaaagtcgctgagaatagttttgttgttataatgcttgctaagaataaggtttca
acaagtgcaacctcagctgcgcaaccagcaccttcaaatacggcccaacctgcaacctcc
actggccaacctacacagactgtaacagcacctcaagcaactgctgcaagcctggcgcct
gcacaatctgctcctcagtctgctcctactcctgccgctgcgccagtttcctctaatcct
gtgacagatgtgtatggccaagcggcatcgaatcttgttgccggaagtaccttagaagct
acagttcaacagattcttgatatgggtggtggaagttgggatcgggatacggttattcgt
gctctacgtgctgcatttaacaatccagagagagctattgaatacttgtattctggtatt
cctgagcaagcagaaattccacctgctgctcctgctcctgctcttgctcctgccagcgga
caggcagtaaatcctccggttcaggcttcacagccggcagttccgtccggtggcccaaac
gctaatcctttagatctctttcctcagggccttccaaatgtcggttccaatgctggagct
ggaaatttagatttcttaagcaatagtccacagtttcaagcccttcgagcaatggtgcaa
gcaaacccgcagatattgcagcctatgctccaggagttgggtaagcaaaatcctcaattg
atgcggcttattcaagaacaccaagctgactttctgcgcctcatcaatgaacctgttgag
agcgaggggaatgtgcccgggcagccggcaggggctataccacaagctgtgactgtcaca
cctgaagagcgtgaggctatcgaacgacttgaagctatgggtttcgatcgagctttggta
ttgcaagtattttttgcatgcaacaaaaatgaggagctggctgcaaactatctcttggat
catatgcatgagtttgacgaatga

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