Nicotiana tabacum (common tobacco): 107831990
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Entry
107831990 CDS
T04643
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107831990
Membrane trafficking [BR:
nta04131
]
Protein recycling
Others
EARP complex
107831990
Endosome - Golgi transport
Tethering complex
GARP complex
107831990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
PWI
SPG48
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
107831990
NCBI-ProteinID:
XP_016515273
UniProt:
A0A1S4DQ65
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All DBs
Position
3:complement(213430067..213447380)
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AA seq
706 aa
AA seq
DB search
MAEVADNTSANANNGQKSFFDLGSFVGDLNIEDEIASADISLEGLEEELQECKTDDVVAN
ILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDMILTQMETLLSG
FQGEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIVPPRMIDIIVDGEVNE
EYMRTLEILSKKLKYSDADLMVKTSKALKDVRPELQRLRQKAVSKVFDFMVQKLYSLRKP
KTNIQILQQSVLLKYKYILSFLKEHGKEVYLEVRAAYTDTMNKVLSAQFRAYIQALEKLQ
LDIATSNDLIGVETRSTGLFLRGREPLKNRSAVFALGERINILKEIEEPPLIPHIAEASS
KKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEQTMFYDIFAGTGGPFSVIDEHFGTILP
NSFDAIGLLLMIRIIYHHQLVMSRRRIPCLDSYLDKVNIALWPRFKMVFDLHLNSLRNAN
IRTLWEDDVHPHYVIRRYAEFTASLIHLNVEYGDGQLELNLERLRMAVDDSLVKLAQMFA
KQKQQTVFLINNYDMTISVLKEAGPDGGKIQQHFEELLKNNTSIFVEELLLEHFSDLIKF
VKTRGSEDPSIGTERPITIAEVEPIVKDFASRWKAAIELMHNDVITSFSNFLCGMDILRA
ALTQLLLYYTRLSDCIKRINGGSTLNKDLVSISSIVYEIRKYSRTF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggctgacaacacatcggccaatgcgaataatggacagaaatctttcttt
gatttgggatccttcgttggcgatttgaatattgaggatgaaattgccagtgctgatata
tcccttgaggggcttgaggaagagttacaggaatgtaaaactgatgatgttgtcgcaaac
atactttctaaaggtacaacgttgcgggaatacactaaaggcgttgaaaacaatttgcgg
caagttgaattggattctatccaggattacataaaggaaagtgataatctagtctcactt
catgatcaaattcgtgattgcgacatgattcttacccaaatggagactcttctcagtgga
tttcagggagagataggttctataagttcagatatcaaaattctccaagagaagtctatg
gatatgggactgaggctgaagaatcgcaaggtggcagagtcaaagctggcaaagtttgtc
gaggatattattgttcctccaaggatgatagacataattgttgatggagaggttaatgag
gaatacatgaggacccttgagattttgagtaaaaagctgaagtattcagatgcagatctc
atggttaaaacatcaaaggctctgaaagatgttcggcctgaactacaaagacttaggcag
aaagcggtctccaaggtgtttgatttcatggttcagaagctatactctttaaggaaaccc
aaaactaatattcagatccttcagcagagtgtccttctaaaatataagtatatcctttcc
tttcttaaggagcatggcaaggaggtgtatcttgaggttcgagctgcatacactgacaca
atgaacaaggttctgagtgcacagttccgcgcttatattcaagctttagaaaagcttcag
ttggatatagcaacatctaatgatctgataggtgttgagaccagaagcacaggtcttttc
ttgagaggaagagaaccattgaagaacaggtctgcagtttttgctcttggagaaaggata
aacattctcaaggagattgaagagcctccattaattccacatatcgctgaagccagctca
aaaaaatatccgtatgaggtccttttcaggagtttgcacaagctgctcatggatactgct
tcttcggagtaccttttctgtgatgatttctttggagagcagaccatgttttatgatata
tttgctggtacgggaggcccattttcagtaattgatgagcatttcggtacaatccttccc
aatagttttgatgcaattggcttactgctcatgattcgcatcatataccaccaccagctt
gtaatgtccagacgccgaattccatgcctggattcatacttagacaaggtcaatattgct
ttatggccacgtttcaagatggtctttgacttgcacctcaacagcctgcgaaatgccaat
atcaggactctctgggaagatgatgttcacccacattatgtcataaggcgctatgctgag
tttactgcctcccttattcaccttaatgtagaatatggagatgggcagcttgaactgaat
ctggagagactcagaatggctgttgatgactcgcttgtcaagctagcacaaatgttcgct
aaacaaaagcagcaaaccgtattccttataaacaactacgacatgacaatatcggttctg
aaggaagctggtccagatggggggaagatccagcagcactttgaagagcttctaaagaat
aacacatccatattcgtggaagaattgctattggaacattttagcgatcttatcaagttt
gtaaagacgagagggtctgaggatccaagtattggcactgaaaggcctataactattgct
gaagtcgagccgattgtaaaggactttgcaagcagatggaaagccgcaattgaacttatg
cacaatgatgtcattacttctttcagcaatttcctgtgtggaatggacattctaagagct
gcattaactcaacttcttctttattatacgaggctttcagattgtataaagaggataaat
ggtgggtctacattgaacaaagatcttgtttcaatttcatccatagtgtatgagatcaga
aaatactcaaggactttctag
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