Nicotiana tabacum (common tobacco): 107832126
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Entry
107832126 CDS
T04643
Name
(RefSeq) uncharacterized LOC107832126
KO
K10756
replication factor C subunit 3/5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03410
Base excision repair
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107832126
03410 Base excision repair
107832126
03420 Nucleotide excision repair
107832126
03430 Mismatch repair
107832126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nta03032
]
107832126
03036 Chromosome and associated proteins [BR:
nta03036
]
107832126
03400 DNA repair and recombination proteins [BR:
nta03400
]
107832126
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107832126
DNA Replication Termination Factors
ELG1-RFC complex
107832126
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107832126
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107832126
Check point factors
HRAD17(Rad24)-RFC complex
107832126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
DNA_pol3_delta2
RFC_C
RuvB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
107832126
NCBI-ProteinID:
XP_016515421
UniProt:
A0A1S4DPR9
LinkDB
All DBs
Position
Un
AA seq
886 aa
AA seq
DB search
MESYSASNRALQVKNSSSVKQRRSGYEPSDTETDWQESPSLELNTKNVDIIIDTESQQQN
VLAFDQAKNKYSSINPRRPSKSPYKSRRDEGDVHFRRLALRAQHVITPFSHSNARRNVSP
FSKSEYRRPPSHSNARRNVSPFSKSEYRRPPSHSNARRNVSPFSKSEYRRPPSHSNVRRD
VSPFSKSEYRRRHNSVHISRRENSKEEHHLDKQSFSSSTRKQNNIVLLKNEVAIRAKANY
SRRAISAPRPALFDTSKDRRRTEITRSPTSRTLSSVGEMNVILANAKISRGSNIPAGVNN
MFQSTESISPSDVFFTKEYSAFTIEKITIPENSVTHSKFNSMPRVSTDKNVSSVNKTPAN
FSQNGRGISTSTIVTSNSISMPQVSTDRNVSCVNKMSANFNQSDRGIISSSTIVTRTATT
NPSSAISRQSSKLSNATTRTSRSAKNFTANRKKSSSQTEEWFSCIKNGSCRKSRKDQSPE
RGRLINEASVIDKAFVVESLRQFWADKHQPTSLDGFICNKQQALLLSHLVSSNEPLPHIL
FKGPPGSGKRALSIALLREIYGDAICNETKPVQVIVPVSSSPHHIELNVHLEPNARFALL
ALVKQISSEFALTPEVSRINMKADSKVLVLYDVDKSEENMQHLIKWIIDCNSDACKLILF
SESDASILELVRSRCTVIEVEAPATHEIVEVLIEISRKEDLELSRGFAAKIATKSKQNMR
RAIMALEACKAHNYPFAEDQPISVGWEESVLELAAEILTDPTPTRLFSIRGKFQKLLVEF
VHPKLILLKLVEQFLKRVDGGLKREIYYWHAYYVSSTPLFFNFYLRKTNIWSNPRPFSGQ
KTPNWNKRSLKIRRICSQNYEHIQETIGQHSAVKLCQVRLKEAKIG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggagagttattctgcttctaacagagcgttacaagttaaaaattcgtcctctgtaaag
caaaggcgaagcggatatgagccatctgatacagagaccgattggcaggaaagtccaagc
ctggaactaaatacaaagaatgttgatataattattgacactgaatcccaacagcaaaat
gtattagcttttgatcaagcgaagaacaaatattcgagtataaacccgagaaggccaagc
aaatccccgtataaatcgcgcagagatgaaggtgatgttcattttcgtcgacttgctcta
cgtgcacaacatgttattactccattttcacattcaaatgctcgtagaaatgtaagtccc
ttttcaaaatccgaatatcgtagaccaccttcacattcaaatgctcgtagaaatgtaagt
cccttttcaaaatccgaatatcgtagaccaccttcacattcaaatgctcgtagaaatgta
agtcccttttcaaaatccgaatatcgtagaccaccttcacattcaaatgttcgtagagat
gttagtcctttttcaaaatctgaatatcgacgtagacataattcagtacatatatccagg
agagagaattcaaaagaggaacatcaccttgacaagcaaagcttttcgagttcaactaga
aagcaaaataacatagtactactaaaaaatgaggttgcaatccgtgccaaagcaaattat
agtcgcagggctatatccgctcctagacctgctctttttgacacgtccaaggatcgaaga
agaacagaaataacacgatccccaacgtcgaggaccttgtcttctgtaggtgaaatgaat
gtaatattagccaatgcaaagatctcaagaggctccaatattccagctggtgtgaataat
atgtttcaaagcactgaatctatttcaccaagtgatgttttctttactaaggaatattca
gcttttaccatcgaaaaaattaccatccctgaaaatagtgtcacacatagcaaattcaat
tcaatgcctcgggtatcgactgataaaaatgtcagttctgttaataagacgcccgcgaat
ttcagtcaaaatggaaggggaatttcaactagcactattgtaacaagcaattccatttca
atgcctcaggtatcgactgatagaaatgtcagttgtgtgaataaaatgtccgcaaatttc
aatcagagtgacaggggaattatttcatctagtactattgtgacacgaacagcaactacg
aatccgagttctgctataagtaggcagagcagtaaactaagtaatgctacaacaaggacg
agtagaagtgcaaaaaacttcacagcaaataggaaaaagagtagtagtcaaacagaagaa
tggttttcttgtataaagaatggatcttgtagaaaatcaagaaaagatcaatctccagaa
agagggaggcttattaatgaagcttcagtaattgacaaggcatttgttgttgaaagtttg
agacaattttgggctgataaacatcaaccaacttcattggatggattcatttgcaacaag
caacaagctttactacttagtcatcttgtttcttcaaatgaaccactcccacacatcttg
ttcaagggtcctccgggatctggtaaaagagcattatcgatagctcttttgcgtgaaatc
tatggcgatgcaatttgcaatgaaacgaagccagttcaagtcattgtaccagtaagctca
agtcctcaccatattgagctcaatgttcatttagagcccaatgctagatttgcattattg
gctttggttaagcaaataagcagtgaatttgcactaaccccggaagtaagcaggattaat
atgaaggcagattccaaagtattagttctttacgacgtggataaatctgaggagaacatg
caacacttaataaaatggatcatcgactgtaattcagatgcttgtaagctcattctcttc
agtgaaagtgatgcatctatactcgagttagtgagaagtcgctgcacggttattgaagtt
gaagctccagcaactcatgaaattgtggaagttctcattgagatatcaagaaaagaagac
cttgaactatctaggggctttgctgctaaaatagctacaaaatcaaagcaaaacatgaga
agagcaataatggctcttgaagcctgcaaagcacacaactatccttttgctgaggatcaa
ccaatttcagtaggatgggaagaatctgtactagaacttgcagcggaaattctaactgat
ccaactccaacaaggttattttctattcggggcaagttccaaaaactcctagtcgagttt
gtgcacccaaaacttatactcctgaaacttgttgaacaattccttaagagggttgatgga
ggtttaaaaagggaaatatattattggcatgcttattatgtaagttctacccctttattt
ttcaatttttatttgagaaaaactaatatatggagtaacccaaggccattttcaggacaa
aagactcccaattggaacaagcgctctcttaaaattagaagaatttgtagccaaaattat
gagcatatacaggaaacgatcgggcaacattcagcagtaaaattgtgccaagtcagacta
aaggaggctaaaattggttaa
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