Nicotiana tabacum (common tobacco): 107832678
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Entry
107832678 CDS
T04643
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107832678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107832678
03009 Ribosome biogenesis [BR:
nta03009
]
107832678
04131 Membrane trafficking [BR:
nta04131
]
107832678
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107832678
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107832678
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107832678
Membrane trafficking [BR:
nta04131
]
SNARE
SNARE associated proteins
Others
107832678
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107832678
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107832678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_33
AAA_16
AAA_2
AAA_5
AAA_14
TIP49
AAA_22
NPHP3_N
AAA_18
AAA_28
Viral_helicase1
AAA_17
RNA_helicase
nSTAND3
nSTAND_NTPase5
NB-ARC
Mg_chelatase
ABC_tran
ATPase_2
Vps4_C
TsaE
Zeta_toxin
AAA_7
NACHT
Cytidylate_kin
DUF815
Parvo_NS1
IstB_IS21
AAA_24
AAA_lid_PRS2_C
AAA_29
Molydop_binding
AstA_C
Motif
Other DBs
NCBI-GeneID:
107832678
NCBI-ProteinID:
XP_016516024
UniProt:
A0A1S4DSB2
LinkDB
All DBs
Position
18:15362415..15364935
Genome browser
AA seq
814 aa
AA seq
DB search
MKGKNKNQSSESKEIKKDYTTAILERKKAPNRLIVDESTKDENSIVFLNPETMEKLQLFR
GDTVLIKGKRKRDTISTAEVDETCEESKIRMNKVVRNNLRIRLGDIASVHLCSNIQYGKR
VHVLPIDDTIEGLTGDLFEVYLKPYFTDSYRPLRKGDIFNVRGGMRSVEFKVVETDPPDY
CIVAPDTEIFIEGDPIRREDEERALDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKCI
GVKPPKGILLYGPPGSGKTTIARAVANETGAFFLVINGPEIMSKMAGESEANLRNAFVEA
EKNAPSIIFIDEVDSIAPNREKTNGEVERRIVSQLLTLMDGLKSRAHVVVMAATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEILLVHTKNMKLDEDVDLEMVAKDTHGHVGADLAA
LTTEAALQCIREKMDVIDMEDDTIDADVLNSMAVNNEHFKAALGTTNPSSLRETVVEVPN
VSWDDIGGLETVKRELQETVQYPVEHPELFEKFGMSASKGVLFHGPPGCGKTLLAKAVAN
ECQANFISVKGPELLTMWFGESEANVRELFDKARQSAPCILFFDELDSIAIKRGSSVGDA
GGAADRVLNQLLTEMDGMNAKKTVFVIGATNRPDILDPALLRPGRLDQLIYIPLPDEESR
YQIFRACLRKSPVSSKVDLKHLAKLTEGYSGADITEICQRACKYAIRGEIEKDIEREKKR
MENPDIMEEDIQEEVAEIKVSHFEESMKYARRSVSDLDISKYHDFAQSLQQSRGFGSEFN
FTNNNTAATDANAAKENPFENSAGVKDCDAELYD
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaaaaacaaaaaccaatcctctgaatccaaagaaatcaaaaaagactatacc
acagcaattcttgaaaggaaaaaagctccaaatagactcatagttgatgaatcaacaaaa
gatgaaaattccattgtttttctcaatccagaaactatggaaaaacttcaactatttcgc
ggcgatactgttttaatcaaaggaaaaagaaaaagagatacaattagtacagcagaagtt
gatgaaacatgtgaagaatcaaagattcgtatgaacaaagttgttagaaacaacctacga
atccgtttaggtgatattgcttctgtccatctttgtagtaatattcaatatggtaaacgt
gtgcatgttcttcctattgatgatactattgaaggtttaacaggtgatctatttgaggtt
tatttaaaaccttattttactgattcttatcgtcctttacgaaaaggtgatatttttaat
gttagaggagggatgaggagtgtagagtttaaggttgtggaaactgatccacctgattat
tgtattgttgctcctgatacggagatttttatcgagggtgatccgattagaagggaagac
gaggaacgagcattagacgagattggttacgatgatgttggtggtgttaggaaacaaatg
gcgcaaattcgcgagttggttgagttgccattgagacatccacagctttttaagtgcatt
ggtgtgaaaccccctaaagggattcttttgtatggacctcctggttcagggaaaactact
atagcccgagctgtggctaatgaaactggtgcttttttcttggttattaatggacctgag
attatgtctaagatggctggtgagagtgaggctaatttgaggaatgcttttgtggaagct
gaaaagaatgcaccttctataattttcattgatgaggttgattctatcgcgcctaataga
gaaaaaactaatggagaggtagaaaggaggattgtttcgcagcttttgactttaatggat
ggacttaagtcgcgtgcacatgttgtcgttatggctgcaacgaataggcctaatagtatt
gatcctgcactgagaaggtttgggagattcgatagggaaattgacattggcgtgcctgat
gaggttggtcgccttgagattcttcttgttcacacaaagaacatgaagttggacgaggat
gttgatttggaaatggttgcaaaggatacacatggtcatgttggtgctgatttagcagca
ttgactactgaggctgcgcttcaatgcattagggagaagatggatgttatcgacatggaa
gacgatacaattgatgctgatgtactcaattccatggcagttaataacgaacatttcaag
gctgctttaggaacaacaaatccctcttctcttcgcgagacagtcgttgaagttccaaac
gtttcatgggatgatattggagggcttgaaactgtcaaacgcgagcttcaagagacagta
cagtatccagtggaacatcctgaattgtttgagaaattcgggatgtctgcttcaaagggt
gttttgttccatggtcctcccggatgtggaaaaactctgttggctaaggcagtagccaac
gaatgccaagcaaacttcattagtgtcaaaggtcctgaattgcttacaatgtggtttgga
gaaagtgaagccaatgtcagagaacttttcgacaaggcacgccaatctgcaccttgcatt
ctgttcttcgacgaattggattcaattgctattaagagaggaagttcagtaggcgatgct
ggtggcgctgctgatagagtcttgaatcagctcctaaccgaaatggatggaatgaatgcc
aagaaaactgtttttgtgataggtgcaaccaatcggccagatattcttgatcctgcactt
ttaaggcccgggcgccttgaccaattgatatacattcctctccctgatgaagaatcaaga
taccaaatttttcgcgcatgcttaagaaaatcacctgtttccagtaaagtagacttgaaa
catctagccaagttaactgaaggttacagtggagcagacattactgaaatatgtcaacgc
gcttgcaaatacgcgatcaggggagaaatcgaaaaggatattgagagggagaagaagaga
atggagaatcctgatataatggaggaagatattcaagaagaggttgctgaaattaaggta
tcacattttgaggaatcaatgaagtatgctaggagaagtgttagtgatttggacatttca
aaataccatgattttgctcagtctttgcaacagtcaagaggctttggtagtgaattcaac
ttcacaaataataacactgctgctactgatgctaatgctgctaaggaaaatccttttgag
aattctgctggagttaaagattgtgatgctgagttatatgattag
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