Nicotiana tabacum (common tobacco): 142173290
Help
Entry
142173290 CDS
T04643
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142173290
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
142173290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
142173290
NCBI-ProteinID:
XP_075094629
UniProt:
A0AC58TBP2
LinkDB
All DBs
Position
2:complement(120445043..120448764)
Genome browser
AA seq
401 aa
AA seq
DB search
MELKFTSFAFLLLFFARIGDAQPTASPGVFDVTKYGATTNGDISKAVLDAFKEACAATSP
STIVIPKGTYQMNQVKLQGPCKAPVELQVQAILKAPSDPKQLSADIEWLTVNYIDRFTLS
GGGVFDGQGKQAWGQNNCKDSKSCSNLPNNLSFNFLTNSTIQDITSQDSKLFHINVNGCK
NLTFIRVNITAPQESINTDGIHVARSSNVNITDCVIGTGDDCISVGDELEQLHITRVTCG
PGHGISVGSLGKTPGEKPVVGVYVKNCTFINTDNGVRVKTWPASHQGVVTDLHYEDIIVQ
NVSNPIVIDQVYCPYNQCNKDLPSKVKISKVSIKNIRGTSRTQDAVLLLCSKGAPCDGVE
VGDIDITYNGKEGPAKSSCENVKPKLVGKQNPPICAGAQSS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaatttacatcgtttgcatttttattgttattttttgcacgaattggagac
gctcaaccaacagcttcgcccggagtctttgatgttaccaaatatggcgcaacaactaat
ggagatatcagtaaggctgtgttagatgcttttaaagaggcatgtgcagcaacaagccca
agtacaatagtgataccaaaaggtacatatcaaatgaatcaagtaaaactacaagggcca
tgcaaagcaccagttgagctacaagttcaagccattttgaaagctccttcagatcctaaa
caactcagtgcagatattgaatggttaactgttaattatattgatcgtttcacactttct
ggtggtggtgtttttgatggccaaggtaaacaagcttggggtcaaaataattgcaaggat
tccaaaagttgcagcaatcttcccaataatttgagcttcaacttccttacaaattccaca
atccaagacataacttcacaagacagcaaactattccatatcaacgtgaatggttgcaag
aacttgacattcatcagagtaaacatcacagctccacaagaaagcatcaacacagatggc
attcacgtcgcgcgatcgagcaacgtgaacatcacagattgtgtaatcggtacaggagat
gactgtatttctgtaggagatgaattggaacagcttcatatcactagagttacttgtggt
cctggccatggtattagtgttggaagccttgggaaaactccaggtgaaaagccagtggtt
ggagtttatgtaaaaaattgcacatttattaatactgataatggtgttagagtaaagaca
tggccagcttcacatcaaggtgttgtcacagatttgcactatgaagatatcattgtgcaa
aatgttagcaaccctattgtcattgatcaagtctattgcccttacaatcaatgcaacaaa
gatttgccatcaaaagtaaagataagcaaagtgagcataaaaaacataaggggaacatca
agaacacaagatgcagtgcttttactgtgcagtaaaggtgcaccatgtgatggagtggag
gttggagatatagacattacctataatggaaaagaaggaccagccaaatctagttgtgaa
aatgtgaagccaaagttagtagggaaacagaatccaccaatttgtgctggagctcagtct
tcttga
DBGET
integrated database retrieval system
