Nicotiana tabacum (common tobacco): 800443
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Entry
800443 CDS
T04643
Symbol
rpoA, NitaCp057
Name
(RefSeq) RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
800443 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
800443 (rpoA)
03400 DNA repair and recombination proteins [BR:
nta03400
]
800443 (rpoA)
Enzymes [BR:
nta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
800443 (rpoA)
Transcription machinery [BR:
nta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
800443 (rpoA)
DNA repair and recombination proteins [BR:
nta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
800443 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
800443
NCBI-ProteinID:
NP_054532
UniProt:
P06269
A0A140G1U9
Structure
PDB
PDBj
LinkDB
All DBs
Position
PT
AA seq
337 aa
AA seq
DB search
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSEKVPHEYSTITGIQESVHEILMNLKEIILRSNLYGTSDASICVKGPGSVTAQD
IILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQ
DNQHTVPLSPFTFHDKLAKLIKNKKKIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLN
NSQEDLMKIEHFRSEDVKRILGILEKYFVIDLAKNKF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agaacagacagtaaacgcctttattatggacgctttattctgtctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagctttacttggagaaatagaaggaaca
tgtatcacacgtgtaaaatctgagaaagtcccacatgaatattctaccataacgggcatt
caagaatcggtacatgaaattttaatgaatttgaaagaaattatattaagaagtaatcta
tatggaacttctgacgcatctatttgtgtcaagggtcctggatctgtaactgcccaagat
atcatcttgccgccttatgtagaaatcgttgataatacacaacatatagccagtttaacg
gaaccaattgatttttgtattggattacaaatagagagaaatcgtggatatcttataaaa
acgccacataactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aacgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaacggaagtttaactccgaaagaagcacttcatgaagcatcccga
aatttaattgatttatttattccctttttacatatggaggaagacaacttatatttacag
gacaatcaacacacggttcctttatccccttttacctttcatgataaattggctaaactc
ataaaaaacaaaaaaaaaatagcattgaaatcgatttttattgaccaatcagaattgcct
tccaggatctataattgcctcaaaatgtccaatatatatacattgttggaccttttgaat
aacagccaagaagatcttatgaaaattgaacattttcgtagcgaagatgtaaaacggata
ttgggcattttagaaaaatatttcgtaattgatttagcaaaaaataagttttaa
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