KEGG   Nicotiana tabacum (common tobacco): 800443
Entry
800443            CDS       T04643                                 
Symbol
rpoA, NitaCp057
Name
(RefSeq) RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    800443 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    800443 (rpoA)
   03400 DNA repair and recombination proteins [BR:nta03400]
    800443 (rpoA)
Enzymes [BR:nta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     800443 (rpoA)
Transcription machinery [BR:nta03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     800443 (rpoA)
DNA repair and recombination proteins [BR:nta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      800443 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-GeneID: 800443
NCBI-ProteinID: NP_054532
UniProt: P06269 A0A140G1U9
Structure
LinkDB
Position
PT
AA seq 337 aa
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSEKVPHEYSTITGIQESVHEILMNLKEIILRSNLYGTSDASICVKGPGSVTAQD
IILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEDNLYLQ
DNQHTVPLSPFTFHDKLAKLIKNKKKIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLN
NSQEDLMKIEHFRSEDVKRILGILEKYFVIDLAKNKF
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agaacagacagtaaacgcctttattatggacgctttattctgtctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagctttacttggagaaatagaaggaaca
tgtatcacacgtgtaaaatctgagaaagtcccacatgaatattctaccataacgggcatt
caagaatcggtacatgaaattttaatgaatttgaaagaaattatattaagaagtaatcta
tatggaacttctgacgcatctatttgtgtcaagggtcctggatctgtaactgcccaagat
atcatcttgccgccttatgtagaaatcgttgataatacacaacatatagccagtttaacg
gaaccaattgatttttgtattggattacaaatagagagaaatcgtggatatcttataaaa
acgccacataactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aacgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaacggaagtttaactccgaaagaagcacttcatgaagcatcccga
aatttaattgatttatttattccctttttacatatggaggaagacaacttatatttacag
gacaatcaacacacggttcctttatccccttttacctttcatgataaattggctaaactc
ataaaaaacaaaaaaaaaatagcattgaaatcgatttttattgaccaatcagaattgcct
tccaggatctataattgcctcaaaatgtccaatatatatacattgttggaccttttgaat
aacagccaagaagatcttatgaaaattgaacattttcgtagcgaagatgtaaaacggata
ttgggcattttagaaaaatatttcgtaattgatttagcaaaaaataagttttaa

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