Caenibius tardaugens: EGO55_02465
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Entry
EGO55_02465 CDS
T05741
Symbol
cofH
Name
(GenBank) 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofH
KO
K11779
FO synthase [EC:
2.5.1.147
4.3.1.32
]
Organism
ntd
Caenibius tardaugens
Pathway
ntd00680
Methane metabolism
ntd01100
Metabolic pathways
ntd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
EGO55_02465 (cofH)
Enzymes [BR:
ntd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.147 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase
EGO55_02465 (cofH)
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.32 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
EGO55_02465 (cofH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
CofH_C
Motif
Other DBs
NCBI-ProteinID:
AZI34955
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All DBs
Position
489126..491534
Genome browser
AA seq
802 aa
AA seq
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MTVSGMHEAELRRIAAEQPLDALMARAAALRDQGFGALVTYSRKVFIPLTHMCRDVCSYC
TFAKPPKKGERNYLTPDEVLAIARAGETAGCREALFTLGDKPELRYRAAREELADLGYAS
TIEYLAAMCRLVVEETSLFPHANPGVMTRAELASLRPLSISQGIMLESTAQHLCARGGPH
FGSPDKDPAVRLQCIRDAGEEQIPFTSGILIGIGETREERIDALIALRDLHDQYGHIQEI
IVQNFRAKADTRMAFADEPDREELLWTIAVARLCFGPAMTIQAPPNLAGSGFGELLAAGI
NDWGGVSPVTPDHVNPEAPWPAIARLEAETAAHGGILAERLAVHPSHLLDLDRWQDVSLH
RPLRETMDTQGLPRVDGWRVGGAEQAPELTLMPGTIRDPRIAAALDAVITGKTLDEAAVV
ALLSARGQDFDTVCTYANRLRQETAGDTVRFVVNRNINYTNICFHKCAFCAFSKGKLAAE
LRGPAYDLDLDEVTRRTAEAWARGATEVCMQGGIHPHYTGQTYLDLLAAAKAGAPDVHVH
AFSPLEVRHGADSLGVSLTEFLTMLRDAGLGSLPGTAAEILDDEVREVLCPEKLTTGEWF
EVIEAAHTVGLRTTATIMYGHIERPEHQARHLLRIRALQERTGGFTEFVPLPFVAMEAPI
YLKGGARPGPTFREAVLLHAVARIVLHPVITNIQVSWVKMGETGVRAALAAGVSDLGGTL
MNESISRAAGAEHGQEWSPEVMERVISDAGRVPAQRSTLYGAVPDERIATGRQAQPLTPM
IQTAPHKRRNNGKLEGSLVQHG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcagcggaatgcacgaagccgaattgcggcgcatcgcagcggaacaaccgctc
gatgcgctgatggcgcgcgccgcagccctgcgcgatcagggctttggcgcgcttgtcacc
tattcgcgcaaggtgttcattccgctgactcatatgtgccgcgatgtctgttcctattgc
acgttcgcaaagcccccgaaaaagggcgaacggaactatctgacaccggatgaggtgctg
gctatcgcccgcgcgggcgaaactgccgggtgccgcgaggccctgttcactctgggggac
aagcccgaactgcgataccgcgccgctcgggaagaactggccgatctcggctatgccagc
acgatcgaatatctcgccgcgatgtgccgtctggtggtggaagaaaccagtctgtttccc
cacgccaatcccggggtgatgacccgtgcggagcttgcctcgctgcgcccgctgtcgatc
tcgcaagggatcatgctggaaagcacggcccagcacttgtgcgcacgcggcggcccgcac
tttggctcgcccgacaaagatcccgctgtccgcctgcaatgcatccgcgatgccggggaa
gaacagatccccttcaccagcggcattctgatcggcattggcgaaacgcgggaagaacgg
atcgatgccctgatcgcgctgcgcgatctgcacgaccagtatggccatattcaggaaatt
atcgtccagaatttccgcgccaaggcggatacacggatggccttcgccgatgaaccggat
cgggaagagctgctgtggaccatcgcggtcgcgcggttgtgctttggcccggcgatgacg
atccaggccccgcccaatctggcaggcagcggctttggcgaactccttgccgcggggatc
aacgactggggcggggtctcccctgtcacccccgatcacgtcaatcccgaagcgccatgg
cccgcaatcgcccggctcgaagcggaaaccgccgcacatggcggcattctggccgaacgg
ctggccgtgcatccttcccacctgctcgatcttgatcgctggcaggatgtcagccttcac
cgccccttgcgtgaaacgatggatacgcaaggcctgccgcgcgtcgatggctggcgagtg
ggcggcgcagaacaagcgcccgaattgaccttgatgcccggtacaatccgcgacccgcgc
atcgctgctgcgctggatgcggtcatcaccggcaagacgctggacgaggcagccgttgtc
gcgctgctttccgcgcgcgggcaggatttcgatacggtttgcacttatgccaaccggttg
cggcaggagacggcgggcgacaccgtgcgcttcgtcgtcaatcgcaatatcaactacacc
aatatctgcttccacaaatgtgcgttctgcgccttttccaaaggcaagctggcggccgaa
ctgcgcggcccggcctatgatctcgatctggacgaagtcacgcgccgcacggcggaggca
tgggcgcgcggggccaccgaagtctgcatgcagggcggcattcacccgcactacaccggg
cagacctatctcgatcttctcgccgccgccaaggcgggcgcgcccgatgtccatgtccat
gccttttccccgctggaagtgcgccatggcgcggattcgctgggcgtcagcctgaccgaa
ttcctcaccatgctgcgcgatgcggggcttggcagcctgcccggcacggccgccgaaatc
ctcgacgatgaagtgcgcgaggtgctctgccctgaaaagctgacaaccggcgaatggttc
gaagtgatcgaggccgcgcacacagtcggcctgcgcaccaccgccacgatcatgtatggc
catatcgaacggcccgaacatcaggcccggcacctgttgcgcattcgcgccctgcaggaa
cgcacgggcgggtttaccgaattcgtgcccctgcccttcgtcgcgatggaagcgccgatc
tatctcaagggtggcgcccgccccggcccgacattccgtgaggcggtgttgcttcatgcc
gtggcccgtatcgtgctgcatccggtgatcaccaatattcaggtgtcgtgggtgaaaatg
ggcgaaaccggggtgcgcgcggcgctggccgccggggtcagcgatctgggcggcacgctg
atgaatgagagcatttcgcgcgcggcaggcgccgaacatgggcaggaatggtcgcccgaa
gtgatggaacgcgtcatttccgatgcaggccgggttcccgcacagcgcagtacgctctat
ggcgcggtacccgatgaacggattgccacggggcgtcaggcgcaaccgcttacccccatg
atacaaaccgccccgcacaagcggcggaacaacggaaaactggaaggatcactggttcaa
catggctga
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