Caenibius tardaugens: EGO55_13230
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Entry
EGO55_13230 CDS
T05741
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ntd
Caenibius tardaugens
Pathway
ntd00300
Lysine biosynthesis
ntd00550
Peptidoglycan biosynthesis
ntd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EGO55_13230
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EGO55_13230
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ntd01011
]
EGO55_13230
Enzymes [BR:
ntd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EGO55_13230
Peptidoglycan biosynthesis and degradation proteins [BR:
ntd01011
]
Precursor biosynthesis
Amino acid ligase
EGO55_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AZI36794
UniProt:
U2YLF2
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All DBs
Position
2813946..2815433
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AA seq
495 aa
AA seq
DB search
MKLGELAASCGYGVSRCGDDTVTGFAIDHRKVAPGTVFGAFQGATVNGEDFIPAAIAAGA
IAVVARPEAVVEGADHIADAEPRRAFARLAAPFFAPFPDQIVAVTGTNGKTSTVEMTRQI
WRMAGHRSASIGTLGVTTADGSVSTGLTTPDIVTFLSNLSGLAREGVSHVAYEASSHGLA
QFRNEGPRVAAGAFTNLSRDHLDYHGTMDAYFAAKMRLFDDVVAEQGSAVVAIGDMSAPD
GHWAGQAVEHARRRGLRVLTVGEQASGIGLLAREPGHLGQKLEIAYEGTRLTVMLPLIGA
YQAANALVSAGLVLATGGDGARTFDALSRLQPVPGRLERAAITPRGAPVYIDYAHTPDAL
EAAIAALRPHTSGRLITVFGAGGDRDTGKRAPMGVAAMKGSDLVIVTDDNPRGEDPAVIR
AMVLEGASGAREVPDRREAIAIAIAEAREGDIVLVAGKGHEQGQIVGRGEATRVLPFDDV
KVARECAGVPMGETQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgggcgagctggcagcgtcgtgtggatacggcgtttcccgctgcggagacgac
acggtcaccggcttcgccatcgatcatcgcaaggttgccccgggcacggtttttggcgcg
tttcagggcgccacggtcaatggggaggatttcattcccgcagccatcgcggcaggtgcg
attgccgtggtcgcccggcccgaagccgtggtcgagggtgcggaccatatcgccgatgcc
gaaccgcgccgcgcctttgcgcgtctggccgcgccgttcttcgcgccgtttcccgaccag
atcgtcgcggtgacggggaccaatggcaagacttcgaccgtggaaatgacccgccagata
tggcgcatggcagggcatcgttccgcatcgatcggcacccttggcgtgaccacggcggac
ggttccgtttcgaccgggctgaccacgccggatattgtgacctttctgtccaacctcagc
gggctggcgcgcgaaggtgtgagccatgtcgcctacgaagcctccagccacgggcttgcg
cagtttcgcaacgaagggccacgtgtcgcggcgggcgcgttcaccaatctcagccgcgat
catctcgattatcacggcacgatggacgcctatttcgcggcaaagatgcgcctgtttgac
gatgttgtcgccgaacaggggtctgctgttgtcgccatcggcgatatgtcggccccggat
ggacattgggccggacaggctgtcgagcacgcgcgcagacgggggttgcgcgtgctcacc
gtgggtgagcaggcttctgggatcggcctgctcgcccgtgaacccgggcatctgggccag
aagctggagattgcctacgaaggcacccggctgacggtcatgttgccgttgatcggtgcc
tatcaggccgccaatgcgctggtttccgcagggcttgtgctggcaacgggcggggacggt
gcgcgcacgttcgacgcgctttcccgtttgcagcctgtgcctgggcgccttgaacgtgcg
gcgatcacaccgcgcggggcgccggtctatatcgactatgcccatacgcccgatgcgctg
gaagccgccattgcggccttgcggccgcacaccagcggacggctgattaccgtgttcggc
gccggtggcgatcgcgacacgggcaagcgggcgccgatgggtgtggcggccatgaaaggg
tccgatcttgtgattgtcacggacgacaatccgcgtggtgaagatccggcggtgatccgc
gccatggtgctggaaggcgccagtggggcgcgggaagtgcccgaccggcgggaggctatc
gccatcgccattgccgaagcgcgcgagggggacatcgtcctcgttgcgggcaaggggcat
gagcaggggcagatcgtggggcgtggagaggcgacccgtgtgctgccattcgatgatgtt
aaagtagcgagagaatgcgcaggcgttcccatgggagaaacacaatga
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