Caenibius tardaugens: EGO55_14540
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Entry
EGO55_14540 CDS
T05741
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ntd
Caenibius tardaugens
Pathway
ntd01501
beta-Lactam resistance
ntd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGO55_14540
01503 Cationic antimicrobial peptide (CAMP) resistance
EGO55_14540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ntd02000
]
EGO55_14540
01504 Antimicrobial resistance genes [BR:
ntd01504
]
EGO55_14540
Transporters [BR:
ntd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EGO55_14540
Antimicrobial resistance genes [BR:
ntd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EGO55_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Tetraspanin
Motif
Other DBs
NCBI-ProteinID:
AZI37027
UniProt:
U2YI71
LinkDB
All DBs
Position
complement(3097803..3101021)
Genome browser
AA seq
1072 aa
AA seq
DB search
MSRIFVDRPIFAWVIAIIVMLAGLGALRALAIDQYPDIAPPQVNIRATYPGASAETVENS
VTQVLEQQLTGLDGLLYFSSQSAATGSVSISVVFAKGTDPDIAQVQVQNKIQSAIARLPQ
SVQNQGVRVSKSNPDALMLLAIYDQSNQRDDREISDYLASNVQDPLSRIDGVGEVDVFGS
PHAMRIWLNPHRLAAMNLMPADVISAIESQNVQVAAGQIGALPSPQGQMLNATVNAQGQL
QTPEQFEQIVVKTLPDGSVVRIRDLARVEIGAENYNTLRRLNGHPAAGLSISLAPGADAL
KTAELIKAQMKELDPDFPDGMVYSFARDNTEFIKLSVEEVGKTLAEAVVLVVLVIFIFLQ
SWRATLIPAIAVPVVLLGTLVVFYFAGFSINTLTMFGLVLAIGLLVDDAIVVVENVERLL
HENPGMSARDATLQSMKEIQVALIAIALVLSAVFLPMSFFGGSTGVIYKQFSLTIISAMV
LSVLVALILSPALTATLLRPKKPRDADGAQGSWLERRFPKAADNAHWAKDRFNQGFNNFV
ERYRQFVAKVIDRKWLALGIYAVLVAIMGTLFLRMPGGFLPNEDQGLIMVQYRLPSGATR
ERTIEVQETIQNYFKTNEKANVQEIFMLVGGGGGGPTGQNSGQGFIKLAPWEDRKGSDNS
ADAIVERASKAFRSIRDAQVFTLIPGSIRGLGNSSGFTMQFQNANGIPRNTFADARDKLV
AAANADSRLTGVRLSNLPDVSELNISVDTRKAAALGVTQNNINSTIATAWGGSYVNDFID
RGRVKRVYVMGDAPYRSRPENLGDWYVRNNTGSMTPFSAFSQVAWGTTPSSTSRFNGLSN
YEIQGQPAPGVSSGEAMQIMQELAAEYPGTSVAWSGASFEERQSSGQAPLLYGLSLLVVF
LCLAALYESWSIPIAAILVIPLGLVGAIFAATLRGLENDVFMQIGLLTTMGLATKNAILI
IEFAEAAEKKGMRIIDAALEGARLRIRPILMTSLAFGFGVLPLALATGAGANSRIAIGTS
VVGGMLTATALAVFYIPLFFVLVRRGVRDGIKAARRRLSPDDKPVSGEGAEA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggattttcgtcgaccggccgattttcgcatgggtcattgcgattatcgtgatg
ctcgccgggcttggtgcgctgcgtgcgctggccatcgaccaatatcccgacatcgcgccg
ccacaggtcaacattcgggcaacataccccggtgcatcggcggaaaccgttgaaaacagc
gtaacccaggtgctcgaacagcagcttaccgggctcgacgggttgctctatttcagttca
caatccgctgcgacaggttcggtgtccatttcggtggtctttgccaagggcacagacccc
gatatcgcgcaggtgcaagtccagaacaagattcagtccgccatcgcccgccttccacaa
agcgttcaaaatcagggcgttcgcgtcagcaaatccaatccggatgcgttgatgctgctg
gcgatctacgaccagtccaaccagcgcgacgatcgcgagatctccgattacctcgcctcc
aatgtgcaggacccgctttcgcgtatcgatggcgtgggcgaagtggatgtgttcggttcg
ccgcatgcgatgcgcatctggctgaacccgcatcgtcttgcggcgatgaacctgatgcca
gccgatgtgatcagtgcgatcgagagccagaacgtgcaggttgccgccggtcagatcggc
gccctgccctcgccgcaggggcagatgctgaacgccacggtcaacgcgcagggccagttg
cagacgccggaacaatttgaacagatcgtcgtcaaaaccctgcccgatggctcggtcgtg
cgcattcgcgatctggcccgcgtggaaatcggggcggaaaactacaacaccttgcgccgg
ttgaacggccaccccgccgcaggtctgtcgatctcgctggcacccggggctgacgcgctc
aaaacggccgaactgatcaaggcccaaatgaaggaactcgatccggatttcccggacggg
atggtctattccttcgcgcgcgacaataccgaattcatcaagctttccgtcgaggaagtc
ggcaagactctggctgaagctgtcgtgctggtggtcttggtaatcttcatcttcctgcaa
agctggcgggccacgctaatcccggcgattgccgtgcctgtcgtgctgctgggcacactg
gtggtgttctatttcgccggattttcgatcaacacgctgacgatgttcgggctcgtgctg
gccatcggcctgctggtcgacgatgcgatcgttgtcgtggagaatgtcgaacgcctgctc
cacgaaaacccggggatgagcgcgcgggacgcaaccttgcaatcgatgaaggaaattcag
gtcgccctgatcgccattgcgctggtcctgtcggccgtattcctgcccatgtccttcttc
ggtggatcaaccggggtcatctacaagcaattttcgctcacgatcatttccgccatggtg
ctgtcggtgttggtggcgcttattctcagccccgcgcttactgcgacgctgcttcgcccg
aaaaagccccgggacgctgatggcgcgcagggctcctggctcgaacgacgcttcccgaaa
gcggccgacaatgcccattgggccaaggaccgcttcaatcaagggtttaacaactttgtc
gaacgttatcgccagttcgtggcgaaagtgatcgatcgcaagtggctcgcgctgggtatt
tacgcggtgctggtcgcgatcatgggcaccttgtttctgcgtatgcccggcggcttcctt
cccaacgaggatcagggtctgatcatggtgcaatatcgcctgccttctggcgccacgcgc
gaacggaccatcgaagtgcaggaaaccatccagaactatttcaaaacgaacgagaaagcg
aacgtccaagaaatcttcatgctggttggcggcggcggcggcggcccgacaggccagaat
tccggccagggcttcatcaagctcgccccatgggaagatcgcaagggaagcgacaattcg
gccgacgcgatcgtggagcgggccagcaaggccttccgttccatacgcgatgcccaggtc
tttactctgattccggggtcaatccggggtcttggcaactcctccggtttcaccatgcaa
ttccagaacgccaatggcattccccgcaacacgttcgcagacgcacgggacaaactggtt
gccgcagccaatgccgattcccgcctgacgggtgtccggttgagcaatctgcccgatgtg
tcggaactgaatatatcggtcgatacgcgcaaggccgcagcactgggtgtaacgcagaac
aatatcaactccaccatcgcaacagcgtggggtggcagctacgtcaacgatttcatcgac
cgcggccgcgtcaaacgcgtctatgtcatgggcgatgcgccctatcgttcgcgccccgaa
aatctcggcgactggtatgtgcgtaacaacaccgggtcgatgacgccgttttccgccttt
tcgcaagtcgcctggggcaccacccccagcagcacatcgcgcttcaacggtctcagcaat
tacgaaatccagggccagcccgcccccggtgtcagctccggcgaggcgatgcagatcatg
caggaactggcggcagaatatccgggaaccagtgtcgcctggtcgggggcatcgtttgaa
gaacgccagtcgtctggacaggcccccctgctttacggcctttccctgctggtggtgttc
ctgtgccttgcggcgctttatgaaagctggtcgatcccgattgcggcgatcctggtcatt
ccgctcggcttggttggcgccattttcgcggccaccctgcgtgggcttgaaaatgacgtg
ttcatgcagatcggtctgctgaccactatgggactggcgacgaagaacgcgatcctgatt
atcgaatttgcagaagcggccgagaaaaagggcatgcggattatcgatgccgcgctcgaa
ggcgcgcgcttgcgcatccgcccgatcctgatgaccagcctcgccttcggctttggcgtt
ctgccgctggccctggccacaggggccggggcaaacagccgtatcgcgatcggcacctcg
gtcgtgggtggcatgttgacggcaacggctcttgccgtgttctacatccccctgttcttc
gtgcttgtccgccggggggtgcgcgatggcatcaaggcggcgcggcggcgcctcagccct
gacgacaagccggtatcgggtgaaggagcggaagcatga
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